Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0583 ATGAAGCGTGAACTCAGTGTCGCTGTTGCTCTTGTTATTAGCTTGCTCTGTATTCAGCACTCATTTTCTGATAAACCTTCTGATACTGGCCTAAACAAATGGAAATGCAGATGCTCTTCTTTCCAAGGGAATCAGATATACTCTCCTGCTAATTGTTCCAAGTCATGTGATTGCCATTCAGATGCTGAAGAGAGTGCATCCATATGGACATGCATATGTGATCCGAATGGGTTTCCTAAAGTGACAGCAGATGGCCATAACCTTAATTGTTTTAATGCCTGCAATTGCACCTGGgGAACTGTCAGGATGCCACTAGGTTCAAAGAAACAAATTTCGAGCAAGATTGTAGTAGTTATTCTATCAATATGTGTTATATGCACAACTCTTGCATTTCTTACCTCAGTTGTATGTCATATCTGCCGAAGGGAGAGATGTCCTATTCAATCACCAATGATCTCATCAGATAAGGAAACAAGTTACAATAGTACCACCGACTTAATTAGTCATAGGACTTCTTCAGTGCCAGAAACAAAAGTTGTTATAAATTCTCCTATTAGTCATATTAGAGgatgTTTTCAGAGGGCCTCTTTGTCGTTTGGTAGCCGAAGAGAAACCTTTCATggaaatattattcaatttttgtttgctGAACTGGAAAATGCCACTGAAAACTTTTCATCTTCCAACCTAATTGGACTAGGTGGAAGCAGTTATGTATACCGTGGTCGGCTGAAAGATGGTAGTAATGTGGCAGTCAAGAGACTAAGAGATCAAAGAGGGCCTGAGGCAGACTCTGAGTTTTTTACGGAGattgAACTATTGTCTAGACTTCATCATTGTCATCTGGTGCCATTGGTGGGATACTGCTcagaattaaaaggaaaaaatgttcAAAGGTTGCTAGTGTTTGAATACATGACTAATGGAAATTTGAGAGACCGCTTAGATGGAGTTTTTGGACAAAAAATTGATTGGTCCACTCGCGTTACAATTGCATTAGGAGCTGCAAGGGGCTTGGAGTATCTTCATGAAGCAGCTGCTCCAAGAATTCTGCACAGAGATGTCAAATCAACAAACATTCTTCTGGATGAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCTAAAAACTTGAGAACTGATGACCACCCTAGTTGTTCAGATTCTCCAGCAAGAATGCAGGGAACATTTGGCTATTTTGCACCTGAGTATGCAATTGTTGGGAGAGCCTCTATTGAGTCAGATGTCTTCAGTTTCGGAGTGGTTCTTCTTGAGCTTATCAGTGGTCGGCAACCCATCCATAAATCTGCAGGCAAAGAAGAAAGTCTTGTTATATGGGCAACTCCTCGCTTACAGGATAGTAGGCGAGTAATAACGGAGTTGGCTGATCCACAATTGAAAGGAAACTTCCCAGAAGAAGAGGTGCAGATAATGGCATACTTAGCAAAGGAGTGCTTGATGTTGGATCCCGACAGTCGACCAACTATGAGTGAAGTTGTTCAAATTCTCTCAAGTATTTCCCCGGGCAAATCTAGAAGGAGAAGAAACATTCCTATGAGCCTTTTTCAGGAACCAGAGGACTTAGAGAAGCAAAGACAAGATCCATCAAGTAGATTTCCATCTCGTAATTTATTGCCACTAGGTATTGACCATAATCTTCATGTTGGGAACGAAAGTGAAGATGTACATACAGTTTCAACTGAGCATATGGAGAGTTTGATCTTGTTTACTTCAAAAGGTGAGAGCTGGCATGCATCAGAAGAGGAAATGGTAGATTTAACTGAGCCCCGTTTTGAATCATTTTTCATGACAAACGTCAATTTCCCTTGCTGA 1836 0.3971 MKRELSVAVALVISLLCIQHSFSDKPSDTGLNKWKCRCSSFQGNQIYSPANCSKSCDCHSDAEESASIWTCICDPNGFPKVTADGHNLNCFNACNCTWGTVRMPLGSKKQISSKIVVVILSICVICTTLAFLTSVVCHICRRERCPIQSPMISSDKETSYNSTTDLISHRTSSVPETKVVINSPISHIRGCFQRASLSFGSRRETFHGNIIQFLFAELENATENFSSSNLIGLGGSSYVYRGRLKDGSNVAVKRLRDQRGPEADSEFFTEIELLSRLHHCHLVPLVGYCSELKGKNVQRLLVFEYMTNGNLRDRLDGVFGQKIDWSTRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNLRTDDHPSCSDSPARMQGTFGYFAPEYAIVGRASIESDVFSFGVVLLELISGRQPIHKSAGKEESLVIWATPRLQDSRRVITELADPQLKGNFPEEEVQIMAYLAKECLMLDPDSRPTMSEVVQILSSISPGKSRRRRNIPMSLFQEPEDLEKQRQDPSSRFPSRNLLPLGIDHNLHVGNESEDVHTVSTEHMESLILFTSKGESWHASEEEMVDLTEPRFESFFMTNVNFPC 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0583 611 PANTHER OS01G0253100 PROTEIN 2 604 IPR045271 GO:0004714|GO:0006468
Ssu8g0583 611 Gene3D Phosphorylase Kinase; domain 1 198 305 - -
Ssu8g0583 611 Gene3D Transferase(Phosphotransferase) domain 1 306 521 - -
Ssu8g0583 611 Pfam Protein kinase domain 227 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0583 611 CDD STKc_IRAK 231 507 - -
Ssu8g0583 611 MobiDBLite consensus disorder prediction 511 540 - -
Ssu8g0583 611 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
Ssu8g0583 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Ssu8g0583 611 SUPERFAMILY Protein kinase-like (PK-like) 206 504 IPR011009 -
Ssu8g0583 611 MobiDBLite consensus disorder prediction 518 537 - -
Ssu8g0583 611 SMART serkin_6 225 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0583 611 ProSiteProfiles Protein kinase domain profile. 225 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0583 611 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0583 Ssu-Chr8 9404575 9408864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0583 1 607 Receptor kinase-like Gene Family AT2G28250 52.365 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Ssu8g0583 Pkinase 3.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0583 - - gmx:100499641 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0583 8 9404575 9408864 Ssu3g2484 3 76996990 77002112 PCT