Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0546 ATGGGAGGAAGAAGCTTAGAGGAAACGCCTACTTGGGCTGTGGCCATTGTTTGCTTCGTTTTGCTCTCCATATCTATCTTCATCGAGCACATCTTCCATCTTATAGGAAAGGGTAAAGTCCCGTTTGTCTCATCCGAGGGTATTCATCAACTCCACATATTTATCTTCGTGCTGGCTGTTTTTCATGTCCTTTGCTGCATACTCACTCTGGCTCTGGGTAGAGCAAAgATGAGAAGGTGGAAACGATGGGAAGAGGAAACCAAGACAGCAGAGTACCAATTTTCACACGATCCTGAACGGTTCAGATTTGCAAGGGAGACATCGTTTGGGAGAAGACACTTGAGTTTCTGGACCCAAAATCATGTCCTCATTTGGATTGTTTGTTTTTTCAGGCAGTTTGTGCGGTCAGTTCCTAAAGTGGATTACTTGACCTTGAGGCATGGATTTATGATGGCACATTTGGGGCCTCAAAGTCACCAGAAGTTCGACTTTCGGCAATACATCAAAAGGTCTTTGGACGAGGACTTCAAAGTGGTTGTTGAAATCAGtcctccaatgtGGTTCATCACAgtgctttttcttctttttaacacTCACGGCTGGTACTCTTATTTGTGGCTGCCATTTGCTCCTTTGATTATCATACTATTAGTTGGAACAAAGTTGCAAGTGACCATAACCAAGATGGGTCAAAGAATTCAACAACGAGGAGAGGTCGTAAAGGGCATGCCACTGGTGCAACCTGGGGATGACCTCTTCTGGTTTAACAAACCTCGACTTATTCTCTACCTCATTAATTTTGTGCTCTTTCAGAATGCTTTTCAGCTTGCCTTCTTTTCATGGACTGCGcttCAATTTGGTAGGAAATCCTGTTTCCATTCCCAAACAGAGGTTGTGGTTATCAGAATCTCAATGGGGGTCTTCGTTCAATTCCTTTGCAGCTACGTGACTCTTCCTCTCTATGCTCTCGTGGCACAGATGGGTTCAACTATGAAGCCAACCATATTCAACGAAAGTGTAGCCAGCGCTTTAAGGAATTGGCACCACAAGGCGAAGAAGCAAATAAAACAGAATCGTGGATTGCACTCGCAAACCCCTTTGTCAAGTAGGCCCACAACCCCGAATCACCCTACATCCCCAGCCCACCTCTTGCGCCACTATCCCATATCTCCAATAAGATCTGACTATAAGGCCCATCATCCCTACGAGATCGATTCACCCCAATCCTCCAACTCGCATCACCATAAGCCCAAGGTCAATGCTTCTTCTTCTAGTTCTGTTCATCACCATGAAATGGAAGTGGGTCACCTGGCCCATGATCCACCACAATATGTCAATGAGCCCATCTCTACCCTTGTGGGCTCAGGTCTGACTCAACACGAGATTGATATTGAACACAGCAAGGaattttcatttgataaaaTATGA 1428 0.4377 MGGRSLEETPTWAVAIVCFVLLSISIFIEHIFHLIGKGKVPFVSSEGIHQLHIFIFVLAVFHVLCCILTLALGRAKMRRWKRWEEETKTAEYQFSHDPERFRFARETSFGRRHLSFWTQNHVLIWIVCFFRQFVRSVPKVDYLTLRHGFMMAHLGPQSHQKFDFRQYIKRSLDEDFKVVVEISPPMWFITVLFLLFNTHGWYSYLWLPFAPLIIILLVGTKLQVTITKMGQRIQQRGEVVKGMPLVQPGDDLFWFNKPRLILYLINFVLFQNAFQLAFFSWTALQFGRKSCFHSQTEVVVIRISMGVFVQFLCSYVTLPLYALVAQMGSTMKPTIFNESVASALRNWHHKAKKQIKQNRGLHSQTPLSSRPTTPNHPTSPAHLLRHYPISPIRSDYKAHHPYEIDSPQSSNSHHHKPKVNASSSSSVHHHEMEVGHLAHDPPQYVNEPISTLVGSGLTQHEIDIEHSKEFSFDKI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0546 475 MobiDBLite consensus disorder prediction 353 383 - -
Ssu8g0546 475 MobiDBLite consensus disorder prediction 404 428 - -
Ssu8g0546 475 MobiDBLite consensus disorder prediction 400 430 - -
Ssu8g0546 475 PANTHER MLO-LIKE PROTEIN 38 473 - -
Ssu8g0546 475 MobiDBLite consensus disorder prediction 358 379 - -
Ssu8g0546 475 PANTHER MLO-LIKE PROTEIN 3 37 - -
Ssu8g0546 475 Pfam Mlo family 37 387 IPR004326 GO:0006952|GO:0016021
Ssu8g0546 475 Pfam Mlo family 4 37 IPR004326 GO:0006952|GO:0016021
Ssu8g0546 475 PANTHER MLO-LIKE PROTEIN 1 3 37 IPR004326 GO:0006952|GO:0016021
Ssu8g0546 475 PANTHER MLO-LIKE PROTEIN 1 38 473 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0546 Ssu-Chr8 8822591 8851594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0546 37 409 MLO family AT1G11310 64.136 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0546 K08472 - gmx:100776714 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0546 8 8822591 8851594 Ssu8g0546 8 8822591 8851594 ECH
Ssu8g0546 8 8822591 8851594 Ssu3g2529 3 77851067 77861721 ECH
Ssu4g1037 4 16652965 16661254 Ssu8g0546 8 8822591 8851594 ECH
Ssu8g0546 8 8822591 8851594 Ssu3g2529 3 77851067 77861721 PCT