Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0440 ATGGAAGGAGGGGCAACACCCCAAGAGAGTGACCAAGCCGGAGACTTGGCAGTAGACACAACAAACCCTGTATTCATGAAGACGACTTCTTTGGGAGACATCATTCTACTCATCCTTGCACTGTGTTTCCATTCAGTTTTTGAGGGCATTGCAGTTGGAGTTGCAGgTACTAAGGCGGACGCATGGAAGAACTTGTGGACGATATCCTTGCACAAGATATTTGCTGCCATCGCAATGGGAATTGCTTTGCTAAGGATGTTACCTAAGAGACCCTTAGTAACAACGGCAGCATATTCTTCGGCCTTTGCTGTCTCTAGCCCCGTTGGCGTGGGGATTGGCATTGCCATAGACGCAACAACACAAGGACGCACCGCAGATTGGATGTATGCTATAACTATGGGTATTGCTTGTGGGGTTTTCATCTATGTTGCCATCAATCATTTGATATCCAAAGGCTTCAAACCGCAGAGGAAGACCCGTTTCGACACTCCCTGGTTTAGGTTTCTCGCTGTGCTTTCTGGTGTAGCTGTTATAGCAGTAGTCATGATCTGGGACTGA 558 0.4749 MEGGATPQESDQAGDLAVDTTNPVFMKTTSLGDIILLILALCFHSVFEGIAVGVAGTKADAWKNLWTISLHKIFAAIAMGIALLRMLPKRPLVTTAAYSSAFAVSSPVGVGIGIAIDATTQGRTADWMYAITMGIACGVFIYVAINHLISKGFKPQRKTRFDTPWFRFLAVLSGVAVIAVVMIWD 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0440 185 PANTHER ZINC/IRON TRANSPORTER 18 184 - -
Ssu8g0440 185 PANTHER ZINC TRANSPORTER 11 18 184 - -
Ssu8g0440 185 Pfam ZIP Zinc transporter 34 181 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0440 Ssu-Chr8 7031254 7032265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0440 29 185 Inorganic Solute Cotransporters AT1G55910 68.153 7.48e-80 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0440 K14709 - gmx:100791492 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0440 8 7031254 7032265 Ssu8g0440 8 7031254 7032265 ECH