Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0439 ATGGCTTCATCCGTTGCTGCTTTCAAAATGAAGACCCTAAAGTCAACGTTCCTCGTTGTGTGCCTGTTGGCCTCGCTCCTCTATCCAATCAAGGCTCACGGAGGAGGTAGTTCCAGCAATGAATCTGACAGAAAAGATTTGCATTCGAGGGGTCTGATCCTGGTGAAGATATGGTGTTTGATCATCATGCTTGTGAGCACTTTCGCTGGCGGGGTGTCTCCTTACTTCTTCCGCTGGAACGAGGCTTTTCTTCTTTTGGGGACTCAGTTCGCTGGTGGGGTTTTCTTGGGAACCGCTTTGATGCATTTCTTGGGCGATTCTGCTGCGACCTTCGGAGACCTCACCACAAATCTTACCCTTTTGCCTTTATGCTGGCTTCATCCGGATACCTTCTCACCATGCTTGGTGACTGCGTTGTGA 420 0.4976 MASSVAAFKMKTLKSTFLVVCLLASLLYPIKAHGGGSSSNESDRKDLHSRGLILVKIWCLIIMLVSTFAGGVSPYFFRWNEAFLLLGTQFAGGVFLGTALMHFLGDSAATFGDLTTNLTLLPLCWLHPDTFSPCLVTAL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0439 139 Pfam ZIP Zinc transporter 54 116 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Ssu8g0439 139 PANTHER ZINC/IRON TRANSPORTER 31 116 - -
Ssu8g0439 139 PANTHER ZINC TRANSPORTER 11 31 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0439 Ssu-Chr8 7030790 7031209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0439 7 114 Inorganic Solute Cotransporters AT5G59520 47.934 3.44e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0439 K14709 K05909 gmx:100791492 183.341