Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0421 ATGGAGTACTCTGTGGAAGCTTTGGGAAGAGATCTAAAGAACATGAGAAAGTACTACGGGAGTGGAAAAACAAAAGGAGCATCATGGAGAGAATCACAGCTTAAAGGGTTGCACAATTTTCTCGtggaaaaagaggaagaaatttTGAGTGCCCTCAAGCAGGATTTGGGGAAGCATTACGTAGAGGCTTTTAGAGATGAGGTGGGCACGTTAATGAAGACCTTAAACTTTGCAACGAACTCTTTGAAAAAATGGATGGCGGGCAAAGAGGCTAAACTGCCACAAATAGCACTACTTTCAAGTGCAGAGATAGTTCCTGAGCCACTTGGTCTTGTGCTCATAATCTCATCATGGAACTTTCCCTTTGGACTGTCCTTGGAGCCACTAATAGGAGCAGTAGCTGCTGGAAACACTGTAGTTCTAAAGCCTTCAGAGATGTCTCctgcttcttcttctcttttagGCACTGTCCTCCCAACTTACTTGGACAATAATGCAATTAAGGTCATCCAAGGGGGGCCAGAAGTGGGGGAGCAACTCCTACAGCAAAGATGGGACAAGATCTTCTTCACAGGAAGTGCAAAGGTGGGGCGGATTGTTATGTCTGCAGCAGCTGTACATCTGACGCCAGTGACTTTGGAGTTAGGTGGAAAATGCCCAGCACTGGTTGACTCTCTTTCTGCTTCTTGGGATAGAGAGGTGGCCGTGAAGCGAATTTTGGTGGCAAAATTTGGGGCTTGTGCGGGACAAGCATGCATAGCAATCGATTATGTCCTTGTAGAGAAGAGTTTCAGTTCTACATTGgtGACATTAATGAAGGACTGGATTAAGAAAATGTTTGGAGAAAACCCCAAAGCGTCCAACACTATTGCAagaattgttaataaaaaacatttcatgAGACTCAAGAATATTCTCACTGATCCAAAGGTCAAAGAATCCGTGGTTTTTGGTGGTTCAATGGACCAAAATGACTTATTTATTGAACCGACAATATTGCTGGATCCACCACTTGATTCAGCAATTATGGCTGAGGAAATCTTTGGCCCAGTGCTTCCAATTATCACCCTGGAGAAGATTGAAGACAGTGTTGAGTTCATAAGCTCAAGGCCTAAACCTTTAGCAATTTATGCCTtcaccaaaaacaaaactctGCAGGGAAGAATGGTATCTGAAACATCATCCGGAAGTCTTGTATTCAACGATGCAATTCTACAATACATAGTGGATACCCTACCATTTGGAGGAGTTGGAGAATGTGGGTTTGGCAAGTACCATGGGAAGTTCTCCTTTGACGCGTTCAGTCATCATAAGGCTGTGGCCAGAAGAAGTTACTTGACTGATTTTTGGTTCAGGTTTCCTCCATGGACTCTTAACAAGCTCCAACTACTTGAGGTGTCTTACAATTTAGACTACCTTGGAATACTTCTAGTTCTGCTCGGCTTAAAGAGATCAAAACGGTCAATATTTCAGGCTTGTAATTGA 1485 0.4128 MEYSVEALGRDLKNMRKYYGSGKTKGASWRESQLKGLHNFLVEKEEEILSALKQDLGKHYVEAFRDEVGTLMKTLNFATNSLKKWMAGKEAKLPQIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNTVVLKPSEMSPASSSLLGTVLPTYLDNNAIKVIQGGPEVGEQLLQQRWDKIFFTGSAKVGRIVMSAAAVHLTPVTLELGGKCPALVDSLSASWDREVAVKRILVAKFGACAGQACIAIDYVLVEKSFSSTLVTLMKDWIKKMFGENPKASNTIARIVNKKHFMRLKNILTDPKVKESVVFGGSMDQNDLFIEPTILLDPPLDSAIMAEEIFGPVLPIITLEKIEDSVEFISSRPKPLAIYAFTKNKTLQGRMVSETSSGSLVFNDAILQYIVDTLPFGGVGECGFGKYHGKFSFDAFSHHKAVARRSYLTDFWFRFPPWTLNKLQLLEVSYNLDYLGILLVLLGLKRSKRSIFQACN 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0421 494 Pfam Aldehyde dehydrogenase family 26 440 IPR015590 GO:0016491
Ssu8g0421 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Ssu8g0421 494 PANTHER ALDEHYDE DEHYDROGENASE 6 492 IPR012394 GO:0006081
Ssu8g0421 494 PIRSF ALDH 3 476 IPR012394 GO:0006081
Ssu8g0421 494 PANTHER ALDEHYDE DEHYDROGENASE 6 492 - -
Ssu8g0421 494 SUPERFAMILY ALDH-like 13 457 IPR016161 GO:0016491
Ssu8g0421 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0421 Ssu-Chr8 6783588 6786263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0421 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 54.132 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0421 K00128 - gmx:100819197 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0421 8 6783588 6786263 Ssu8g0421 8 6783588 6786263 ECH
Ssu8g0421 8 6783588 6786263 Ssu3g2689 3 80639526 80642601 PCT