Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0419 ATGTTGGTGTCAACTGGGGATGTGATCAGTATATGGAAAGAGGTAGATGGTAACTATTGGTGTCGGGTACGCTGGTATACAATCCCGGAAGAGACTTCTGTTGGGAGGCAACCTCATAACCTGAGAAGGGAGCTATATCGAACTAATGATTTTGCTGACATTGAGATGGAATCGGTCCTTAGACATTGCTATGTCATGACTCCCAAAGAATATGCTAAAGCTAGCAATGAGGGAGatgatgttttcttttgtgaataCGAATATGACATCCATTGGCACAGTTTCAAACGTCTTGCTGATATTGGCAATGAAAGAGAGAATGGTGAAGAGACTGACAGTGACGAAGACTGGAATCTTGACAAGGAATCAGATTCTGATACAGATGAAGATGTTGAATATGAagaggaaaatattaaaaatgcacaATCTCAACCATCAACAAGCCATCAGTTAGCTGCAAATCTGCACAAGGGAAGGTTCTTTGGACTTCAGAAGATAGGCACAAAAAGAATTCCACAGCATGTAAGGTCTCGCAAACAGACTGATCTTGAGAGAGCAAAGGCTACACTTTTGTTAGCGTCGCTGCCTAAATCTTTACCTTGTAGAAATAAaGAAATGGAGGAGATAACTACATTCATTAAAGGTGCTATATCTGACGATCAATGTCTAGGGCGTTGCCTCTATATTCACGGTGTTCCGGGAACTGGCAAGACAATGAGTGTACTATCAGTAATGAGGAGTCTGAAGTCAGAAGTTGATGCAGGAAACATCAAACCATACTGTTTTGTGGAGATTAATGGTCTGAAATTGGCATCACCAGAGAATATTTATAGGGTTATATATGAGGCATTGAATGGACACAGGGTCAGCTGGAAAAAGGCTCTCCACTTGCTAAATGATAGATTTGTAGAAGGAAAGAAAACCGGAGAAGAGGCTGACCGGCCATGTATTTTGCTTATTGATGAACTTGATCTTTTAGTGACCAGAAACCAGTCGGTTTTGTACAATATTCTTGACTGGCCTACTAAGCCACATTCCAAGCTAATTGTCATAGGGATAGCAAATACTATGGATCTTCCAGAAAAATTACTTCCTCGTATATCAAGCCGAATGGGCATACAGAGGCTTTGCTTTGGCCCATATAATTATCAGCAGCTTCAAGAGATTATTTCGAGTCGCCTCAAGGGAATTGATGTATTTGAAAAGCAAGCTGTAGAATTTGCATCAAGAAAGGTTGCAGCGATCTCAGGAGATGCACGTCGTGCTTTGGAGATATGCAGACGTGCAGCTGAAATAGCAGATTATCGTATGAAAAATCTAAATTCAAATCCTGATTGTGTTATTGCAGGAAAGGGACTTGTTGGAATGGTAGATGTTGAAGCAGCCATTCAAGAAATGTTCCAAGCACCTCATATTCAAGTGATGAAAAGCTGTTCTAGACTTAGCAAAATTTTCCTGACAGCTATGGTGCACGAGCTTTATAATACAGGAATGGGGGAAACCACTTTTGAAAAGTTGGCAATGAGGGTTTCATGTCTCTGTACAAGCAACGGAGAAGTGTTTCCTGGATACGATACTCTCCTGCAAGTTGGCTGTAAGCTAGGTGAATGCAGGATAATTTTATGCGAAGCAGGTGCCAAACATAAGTTGCAAAAATTGCAGCTTAATTTCCCGAGTGATGATGTGGCCTTTGCGCTGAGAGACTGCAAAGATCTACCTTGGTTGTCCAAGTTTCTGATGTAG 1743 0.4045 MLVSTGDVISIWKEVDGNYWCRVRWYTIPEETSVGRQPHNLRRELYRTNDFADIEMESVLRHCYVMTPKEYAKASNEGDDVFFCEYEYDIHWHSFKRLADIGNERENGEETDSDEDWNLDKESDSDTDEDVEYEEENIKNAQSQPSTSHQLAANLHKGRFFGLQKIGTKRIPQHVRSRKQTDLERAKATLLLASLPKSLPCRNKEMEEITTFIKGAISDDQCLGRCLYIHGVPGTGKTMSVLSVMRSLKSEVDAGNIKPYCFVEINGLKLASPENIYRVIYEALNGHRVSWKKALHLLNDRFVEGKKTGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIISSRLKGIDVFEKQAVEFASRKVAAISGDARRALEICRRAAEIADYRMKNLNSNPDCVIAGKGLVGMVDVEAAIQEMFQAPHIQVMKSCSRLSKIFLTAMVHELYNTGMGETTFEKLAMRVSCLCTSNGEVFPGYDTLLQVGCKLGECRIILCEAGAKHKLQKLQLNFPSDDVAFALRDCKDLPWLSKFLM 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0419 580 Gene3D - 179 374 IPR027417 -
Ssu8g0419 580 SMART AAA_5 223 377 IPR003593 -
Ssu8g0419 580 Gene3D - 375 465 - -
Ssu8g0419 580 MobiDBLite consensus disorder prediction 107 135 - -
Ssu8g0419 580 SMART BAH_4 2 99 IPR001025 GO:0003682
Ssu8g0419 580 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 8 575 IPR020793 -
Ssu8g0419 580 MobiDBLite consensus disorder prediction 105 147 - -
Ssu8g0419 580 Pfam AAA lid domain 401 434 IPR041083 -
Ssu8g0419 580 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 435 IPR027417 -
Ssu8g0419 580 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 8 575 - -
Ssu8g0419 580 ProSiteProfiles BAH domain profile. 1 99 IPR001025 GO:0003682
Ssu8g0419 580 Pfam BAH domain 13 96 IPR001025 GO:0003682
Ssu8g0419 580 Pfam ATPase family associated with various cellular activities (AAA) 228 373 IPR003959 GO:0005524|GO:0016887
Ssu8g0419 580 Gene3D - 3 128 IPR043151 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0419 11 579 Core DNA Replication Machinery Family AT4G14700 71.951 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0419 K02603 - gmx:100798547 1106.66