Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0412 ATGGTTGATAGCCAACAGTACCCAACGATCAAACAAAAGTTTGCGGGCCAGTTTCACTTGAAAAGGCCAACTCTGTTTCAGCAACGATTTTCATtagaaaattattcaaatgcaGGGTTGCAGTGTCCTGTCATGCCTGCATGCAAAGCCACAAGCATTCTGCATTCTGTAGGTTCAGCTGCTTCACCAGTGTTTGTCCCATCCCCGTCAGAGAAAAACTTTGCAAGCTTTGCCACTGATTTTCTCATGGGTGGAGTTTCCGCGGCAGTGTCCAAGACTGCAGCTGCTCCTATTGAGCGTGTAAAGCTTCTGGTTCAAAATCAAGATGAGATGATAAAGGCTGGTCGACTCTCTGAGCCCTACAAGGGCATTGGAGATTGCTTTGGCAGAACAATTAAAGACGAGGGATTTGTGTCATTGTGGAGAGGGAACACTGCCAATGTTATCCGTTACTTCCCAACACAGGCACTGAACTTTGCATTTAAAGACTACTTTAAGAGGCTATTTAACTTCAAGAAAGACAGGGATGGGTACTGGAAATGGCTCGCGGGGAACGTAGCATCTGGTGCCGCAGCAGGAGCTTCATCCTCGGTGTTTGTTTATTCATTGGATTACGCTCGAACCCGCCTTGCCAATGATGCCAAGGCTGGAAAGATGGGTGGAGAGAGGCAATTCAACGGTTTGGTCGATGTCTACAGAAAGACTCTTCAATCGGATGGTGTTGCTGGCCTCTACCGTGGCTTCAACGTCTCTTGGGTTGGAATCATTGTCTACCGTGGTTTGTACTTTGGAATGTATGATTCTCTGAAACCAGTGCTCTTGGTGGGAACTTTGCAGGATAATTTCTTGGCTAGCTTTGCTCTGGGGTGGCTTGTTACTATTGGTGCTAGCATTGCCTCCTACCCCTTAGATACCGTTCGCAGAAGAATGATGATGACATCAGGTGAAGCTGTTAAGTACAAGAGCTCTTTCGATGCATTCTCGCAAATTGTGAAGAATGAAGGGTCAAAATCTCTCTTCAAGGGCGCGGGCGCAAACATCCTTCGTGCAGTTGCTGGTGCTGGTGTGCTTGCAGGCTATGACAAACTTCAGGTACTTGTCCTGGGAAAGAAGTATGGTTCCGGTGGTGCTTAA 1134 0.4665 MVDSQQYPTIKQKFAGQFHLKRPTLFQQRFSLENYSNAGLQCPVMPACKATSILHSVGSAASPVFVPSPSEKNFASFATDFLMGGVSAAVSKTAAAPIERVKLLVQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFVSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWLAGNVASGAAAGASSSVFVYSLDYARTRLANDAKAGKMGGERQFNGLVDVYRKTLQSDGVAGLYRGFNVSWVGIIVYRGLYFGMYDSLKPVLLVGTLQDNFLASFALGWLVTIGASIASYPLDTVRRRMMMTSGEAVKYKSSFDAFSQIVKNEGSKSLFKGAGANILRAVAGAGVLAGYDKLQVLVLGKKYGSGGA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0412 377 PRINTS Adenine nucleotide translocator signature 180 193 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu8g0412 377 PRINTS Adenine nucleotide translocator signature 154 166 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu8g0412 377 PRINTS Adenine nucleotide translocator signature 285 301 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu8g0412 377 PRINTS Adenine nucleotide translocator signature 77 89 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu8g0412 377 PRINTS Adenine nucleotide translocator signature 121 142 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu8g0412 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 180 272 IPR018108 -
Ssu8g0412 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 168 IPR018108 -
Ssu8g0412 377 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1 377 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu8g0412 377 Gene3D Mitochondrial carrier domain 78 373 IPR023395 -
Ssu8g0412 377 Pfam Mitochondrial carrier protein 179 273 IPR018108 -
Ssu8g0412 377 Pfam Mitochondrial carrier protein 281 367 IPR018108 -
Ssu8g0412 377 Pfam Mitochondrial carrier protein 76 172 IPR018108 -
Ssu8g0412 377 PANTHER ADP,ATP CARRIER PROTEIN, MITOCHONDRIAL 1 377 - -
Ssu8g0412 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 280 366 IPR018108 -
Ssu8g0412 377 SUPERFAMILY Mitochondrial carrier 73 362 IPR023395 -
Ssu8g0412 377 PRINTS Mitochondrial carrier protein signature 143 163 IPR002067 GO:0055085
Ssu8g0412 377 PRINTS Mitochondrial carrier protein signature 245 263 IPR002067 GO:0055085
Ssu8g0412 377 PRINTS Mitochondrial carrier protein signature 289 311 IPR002067 GO:0055085
Ssu8g0412 377 PRINTS Mitochondrial carrier protein signature 93 107 IPR002067 GO:0055085
Ssu8g0412 377 PRINTS Mitochondrial carrier protein signature 80 93 IPR002067 GO:0055085
Ssu8g0412 377 PRINTS Mitochondrial carrier protein signature 195 213 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0412 Ssu-Chr8 6624050 6625717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0412 1 377 Antiporters AT5G13490 74.235 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0412 K05863 - gmx:100800843 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0412 8 6624050 6625717 Ssu8g0412 8 6624050 6625717 ECH