Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0391 ATGGAACCGGAAAGATCAGTAGAGGACCAATTCTCCAAGCTACATCCTTCCATGCCAGTAAACACCAGAATTGGAATAGTGGGTGCTGGTCCAAGTGGCTTATCAGCTTCTTATGCACTGGCCAGGCTTGGTTATAATAATATCACTGTCTTAGAGAAACATCATACAGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGATCTAGGTGGCCAAGTTCTGGCTGCAAGCAGTGCTCCAGTCATCTTTCACTTGGCAAAAGAGACAGGCTCTCCACTAGAAGAAATGGACTCCCACAAGCTTGCTGTTATTGACAGTTCCTCTGGAAAATACCAAGATGTTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTTACATTAGAAATCCAAGAAAAGGTGAAGAATTCTGGTCGTTTGGGGGTTCATGCTGTCAGTCAAGTTGCTTCAGAGTTAACTCCAGACTATCTTGAGCGTCATGGACTCAAATCTGTTCCTAAATCTGTGGCTTATGGTTACACTGCTTCAGGATATGGATTTATTCAAGACATGCCTTATGCCTACATTCATGAATTCACCAGAACTTCCATGGCTGGAAAAATTCGACGATTTAAAGGTGGATATACGAGTCTTTGGCAGAGGATTGCTGAATCACTTCCTATAAAACTGCACTGTAACACTGAGGTGTTGGCAATCAAGCGGAACTCTGACAGTGTCATTGTTAATGTCAAGGGCTCAAATGAAATTGAAACTATGGAATTTGATAAGATCATAATCTCGGGTAACTTTCCCTTAAAATACGGAAGAACTTATAGATCAGTGCCTTCTCCTTGCTTAGAGTGTGAGACAGAAGTAATGGATGTAAGTGAGCTTGAAAAGGATTTGTTCAGCAAAGTAGAAACAAATGACTACTACACAACTGTTTTAAAGATCAAAGGGCTGGAACATATGCCTgttggattttattattttagtgaaTATATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCCATGCAAAAGTTTTATGTCGACAGTAACATATTCTTGTTCTGGTCCTATGGCAACTCTGTTGATATTAGGGGACCAACTGTCACTGAGCTTGCAATCAAATCAATAGAAGCCATGGGGGGAGAAGTTGAGAATTTCATTCTTCAACGTCGCTTTAAGTATTTTCCTCATGTTAGCAGCCAAGATATGAAAAACGGATTCTATGAGAAGTTGGAGACAGAGCTTCAAGGCTCAAGGAATACTTATTATGTCGGCGGGCTCATGGCATTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTTTGATCCGCAAGAAGTTTGCAAATAGCAGTGATTTGCCAGTGTTTCCTTACACTAAGAGTTTGTTTCCCTTGCAAACTGAGTTCCAGAAAAAGGAGCCTAAAGAACTTGGTGAATTGCCTGGAGTGCAATTTCCCAATTTGCCTACTTTGAATAGCTATTTAAAGCACTGGAGAACCCATCCAATCACTCAAAACAGAACTCTTTATACTTGGATAAATGAAGGAGGGACAGTGGTTGGCAAGAGGACATATGGAGAACAACATTTAAATGCTTCTTGCATTGCACATAAGCTCTTAACAAGCCAAAAGCCAATTATCAAGCCTGGTGACAGGGTTCTCCTAGTCTATGTTCCTGGTCTTGATTTCATTGATGCCTTCTTTGGATGTCTAAGTGCTAAAGTTATACCAGTCCCAGTTCTTCCCCCAGACCCCATGCAGAGAGGTGGACAAGCACTTCTAAAAATTGAGAACATTGCCAAGTTAAGTGGCATTGTGGCAATTTTATCAACAGTATCTTATCACTCAGCAGTACGTGCAGGTCTAGTGAAAAGTTTGATCTCATTAACTGGAAAAAATGGGAAATCCACGGCTCAATGGCCTAAACTTCCGTGGCTGCACACCGATACTTGGGTCAAGAACTCAAGAATTTTGGCTATGGAAGATGTAGATGATCAATGTGAATCCCAGCCAGGTGATATATGTTTCTTGCAATTTACCTCAGGTTCAACTGGTGATGCTAAAGGAGTCATGATAACACATGGAGGGCTCATTCACAATGTGAAGTTGATGAGAAGTATATACAAGAGCACCTCAAGGACAATGCTAGTGAGTTGGCTTCCACAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTTAGTGGTGGATCTGCTGTGCTGTTTTCACCAATGACATTTATTAAGAAACCACTCCTATGGCTTGAAACCATCAGCAAGTATCAGGCAACTCACAGTGCTGGCCCCAACTTTGCTTTTGAGTTGATCGTTCGAAGGTTAGAGTCTGACAAAGACAAGCTTCAGAATTTAGACATTTCATCCATGATTTTTCTTATGGTTGCTGCTGAGCCAGTGAGACTGAAGACCTTGAAAAGATTTCTTGATTTAACCGCTCCTTTGGGTTTATCTCAAAAGGTGATGGCTCCAGGATATGGCTTGGCAGAAAATTGTGTGTTTGTCAGCTGTGCATTTGGAGAAGGTTGTCCTATTCTTGTTGACTGGCAGGGAAGAGTTTGTTGTGGATATATTCACCCAGGTGATGCAGATATTGACATCAGAATAGTTGATCCAGAGATTGGTGAAGAGTTTCAGGAAGATGGAAAGGAAGGAGAAATCTGGATAAGTAGTCCAAGTGCAGGAATAGGATACTGGGGAAAGGAAGAACTGAGTCAGAAAACTTTCAGAAATGAGCTTCAGGACCATCCTGGACGTAACTACACAAGAACTGGAGACTTGGGAAGAATAATAGATGGGAAGCTATTCATCACTGGGAGGATCAAGGATCTTATCATTGTGGCTGGAAGAAACATCTACTCGGCAGATGTTGAAAAGACAGTTGAGAGTTCATCTGAATTTCTTCGTCCGGGATGTTGTGCAGTCATTGGTGTCCCTGAGGAAATTTTATCAGCAAAAGGGATTTCCCTGCCAGATGGCTCTGACCAAGTTGGCTTGGTTGTGGTAGCTGAAGTAAGGGAGGGTAAAGCAGTTAGCACAGATGTGATTGAGCATATTCAGACTCGTGTGGCAGAAGAACATGGAGTTAGTGTTGCTTCTGTCAAGTTGATCAAGCCAAGAACCATCAGCAAAACAACCTCAGGAAAAATCAAGAGATTTGAATGTCTCAAACAGTTTGCAGACGAAACACTGAACTTGGTGCCACAGCCTATTTTGACAAAGAAATCACTGGTAAGGTCATTTACTACAGGAACATGCAGAGAAGGAAGAACACCCCGGGCACAGCTGGCGAGAAGTAGTACACCTCTACCTATTCCAAGAATCAGTAACAAGGAAATTCTGGAACACTTGAAAAGGCTTATTTCCGAGCAGTCTGGAATCCCAATCAACAATATCTCAGTCACAGACAACATGTCAACCTATGGAATTGATTCAATTGGAGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCCTGGGAGTGCCAGTTGCGGCTATAGATGTTTTCACTGCATCGTGCATTCAAGAACTGGCTAACTTCTCAGAGAATCTTCTGTTGAAGTCTCAACCTCAACTGATGAGCAATTCATCCCATGCTCCAGAAGCTGAATTTGATTCTACTGAAGTGGATGTGTCCAAGTCTCGCCAATGGGGTATCCGTTTACTTCAACTCCTAGCACTAACTTATATTTCTATCATGCTGGTCTCTCCTGCTTATCTGTCCATCACTGCTTTTCAAAGTTTCATACCAAATGCCAGTGAATCAGTATATGGAATGCCTTGGTCAAACTATTTGATTTCTTTGACTCTGGCACCCCTTTCTTGGATCCTTTGCATGGTTTCTACTTGcatttgcatttcatttttcgGGAATTCTTTCTTGAGGCCAAACTATGCCCTTACACCCGAAATATCCATCTATTCAATGGATTTTGTCAAGTGGTGGGCGCTCTATAAAACTCAGGAGATTTCTTCAAAAGTCTTGGCGACACACCTCAGAGGAACAGTGTTTCTGAAATACTGGTTTGAGATGCTTGGTGCAAGAATTGGATCCTTAGTTTTGCTTGACACAGTTGATATCACAGACCCGTCTCTGGTTTCAATTGGAGATGAAGTTGCCATTTCGGAAGGGGTTTTGGTTCAAAGCCATGAGGTGAAGAATGGAATTCTAAGTTTCCTTCCTGTTAGGATAGGTAAAAATTCTTCAATTGGACCTTATGCTGTGATTCAAAAAGGAAGTGTTATTAAAGAAGGAGCTGAGGTACATCCCCTGCAAAAGGTTGAAGGAGGCCAACATGTGCTCAAACCTGCTAAGCTTAATAACGTTAAAGAGaaGGCAGTGTTGCTTGTTACTACCAGCAAAACTCAGTCTAATGTCATGTACCATTTTCTGGGGATCTATCTCACTGGCTTTCTCAGCTCCCTTGCTGCAGCTGTTGCTTACATCCTGTACATAAGGTTCTTCCAGATACCTGCATCATTCCAACACTTCTCATTTGTTTGTATATGTGGGGCCTTTCACTGGATCCCATTTACCATTGTTGCATATGCCACCATGTTTTCTGATGTCCCATCAAATCCCATTGCCTTTACCATTTCATTTACCTGCGCATACTTGCTTCATGGCCTCATACTCACCTCTCTCACCTGTGCTTTGACTCGTTTGCTCAAATTCAATCAAAACCAAACCCATTTTAAAACCTGGCTTCGGCATCAATTGACCATTTCCTGCCACCATAGATTTGCAAAACTTCTCTCAGGAACAGAAGCCTTCTGCATATATTTACGACTTTTGGGTGCAAAAATTGGCAAGCACTGTTCCATTAGAGCCATCAACCCAGTTTCAAACCCTGAGTTAATGTCAATTGGTGATGGTGTCCATCTTGGTGATTTTAGCAGGATCATCACTGGTTTCCACTATTCCAATGGGTATGCTTGTGGGAAAATAGAGGTTCAGGATAATTCAGTTGTTGGGAGTCAAAGCCTAATTCTCCCAGGTTCTGTTGTAGAAAAGAATGTCATTCTAGGTGCACTTTCAGTTGCTCCAATGAATTCTATACTCCGTGAGGGTAGCGTGTATATTGGATCTCAAACCCGAGTTGCAATCAGGAACTCTTCAGGTTCTTTAGATGAACGGATAGAGGAGATGGACATGGAATACAAGAAAGTAGTTGCAAACCTGGCTGCAAATTTAGCTGCCACAACTATTAATGCCAAAGCAAGATACTTCCATCGCATTGGTGTTAGTGGAAAGGGGCACTTGAAAATCTATGACAAACTTGAAGGCATTCCGCTGCACAAGATTTTTCACCCTGGAAAGAGCTACCCCGTCATGGTAAGACACAGCAATAGCTTGAGTGCTGATGATGATGCAAGGATTGATGCACGTGGTGCAGCTTTGAGGATTCTTTCTGGTGCACCTGATTCCAACCATGTTCCCGTCATTGACCTGACACTAAAAACTGGCAACGCATTTTATGCTCGCACTCTTGCTGATTTTGCAAGCTGGCTCGTGTGTGGACTAGCTGCGAGGGAGGAACTTGTCAAGGGTACTCCACGTGTTCGCGAAGCAGTGTGGAATTCCCTTCGACATGCTCACTCATATGCTGAATTGCACTACTACTCAAACATTTGCAGGCTCATGCGCTTCACCGATGGACAAGAAATGTACGTGAAGTTTAAGCTAAGGCCTATTGACACAAGCATTAGTGAGGACACAGGTAAGGTGGAACCAACTGGGATTCTTCCACCCGAGACAGGTGCAATTCCTAGGGATGAACATGATGCACGTCCCTTACTTTTCCTTGCTGAAGATTTTCAACGGCGCGTGAATTCCCCTGATGGAGTTCGTTATGTCTTCCAAGTGCAACTTCGAGCAGTGCCAGATGATGAAGCCACACGTGACCTTGCACTGGACTGCACCAAACCTTGGGATGAAAATGAGTTCCCTTACATTGATGTTGGAGAGATAAACATCAATGAGAGTCTTTCCATGGAAGAATCAGATAGGCTTGAATTTAACCCCTATCTCAAAAGTCACGAGTTGGATGTGATCCCTGCCACTTCCAACACCCAAAGTGCTTCAATTGATCATGGCCGTTCATTGATCTATGAGATTTGCCAGCACGTGCGTAATAGACAGCCACTCCCAGAATCTTGGAGGAACCTCGTAGAGCAATCTAATGTTAAGGTAGACTTGTCTTGTTGTCCCGTGGCAGCAGCATCATTGCCCAAAAAGGAACCAAAAAAAGTTACCTTAACCTTGACAAGAACCTGGTACCAGACCTTCTCAGCGCTCTTCACTCAACCGTTGCTACAAACGGTTTTGCCTTACACGGTGGTGGGTTTGGCTGTTTTCGCTCCTTTGAACTTTGTTGTTAACCTCAAGAATGTTGAGAAACTCCCGGTGCAATGGTTGCTTCCTTTGTTTTGGGTTCTCTCAGGTGTTATGGCTGCGCTGGCATGTGTTGTGGCCAAATGGGTTCTCGTGGGAAGGAAGAAGGAGGGTGAAACTGTACCCTTGTGGAGCAAAAGGGTCGTGATGGATAGCACGTGGCAAGCTATTAGAACTTTGGTTGGGGATTATTTCATGGACATGGCAAGTGGGTCGTTTTTGTTTGTGATGTGGATGAAGTTGATGGGTGCGGACATAAATATGGATGGTTACGTGGACAGCATGGGGGCTTTGTTGAACCCCGAAATGGTGAAGATTGAGAGAGGGGGTTGTGTGGGAAGAGAAGCCTTGCTATTCGGACACATATATGAAGGTGATGAAGGCGGGATGGTGAAGTTTGGGGGAATCAAAATTGGTGAAGATGGGTTTGTGGGGAGTAGAGCCGTCGTCATGCCCGGGGTGCAAATGGAGAATGAGGCCAATCTTTCTGCCTTGTCTCTCGCCATGAAAGGAGAAATAGTTAGGtcaagataa 6960 0.4292 MEPERSVEDQFSKLHPSMPVNTRIGIVGAGPSGLSASYALARLGYNNITVLEKHHTVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSPLEEMDSHKLAVIDSSSGKYQDVKVADDYVSVMSLTLEIQEKVKNSGRLGVHAVSQVASELTPDYLERHGLKSVPKSVAYGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQRIAESLPIKLHCNTEVLAIKRNSDSVIVNVKGSNEIETMEFDKIIISGNFPLKYGRTYRSVPSPCLECETEVMDVSELEKDLFSKVETNDYYTTVLKIKGLEHMPVGFYYFSEYMEDPSTIGNPVAMQKFYVDSNIFLFWSYGNSVDIRGPTVTELAIKSIEAMGGEVENFILQRRFKYFPHVSSQDMKNGFYEKLETELQGSRNTYYVGGLMAFELTERNSSYAMALIRKKFANSSDLPVFPYTKSLFPLQTEFQKKEPKELGELPGVQFPNLPTLNSYLKHWRTHPITQNRTLYTWINEGGTVVGKRTYGEQHLNASCIAHKLLTSQKPIIKPGDRVLLVYVPGLDFIDAFFGCLSAKVIPVPVLPPDPMQRGGQALLKIENIAKLSGIVAILSTVSYHSAVRAGLVKSLISLTGKNGKSTAQWPKLPWLHTDTWVKNSRILAMEDVDDQCESQPGDICFLQFTSGSTGDAKGVMITHGGLIHNVKLMRSIYKSTSRTMLVSWLPQYHDMGLIGGLFTALVSGGSAVLFSPMTFIKKPLLWLETISKYQATHSAGPNFAFELIVRRLESDKDKLQNLDISSMIFLMVAAEPVRLKTLKRFLDLTAPLGLSQKVMAPGYGLAENCVFVSCAFGEGCPILVDWQGRVCCGYIHPGDADIDIRIVDPEIGEEFQEDGKEGEIWISSPSAGIGYWGKEELSQKTFRNELQDHPGRNYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVESSSEFLRPGCCAVIGVPEEILSAKGISLPDGSDQVGLVVVAEVREGKAVSTDVIEHIQTRVAEEHGVSVASVKLIKPRTISKTTSGKIKRFECLKQFADETLNLVPQPILTKKSLVRSFTTGTCREGRTPRAQLARSSTPLPIPRISNKEILEHLKRLISEQSGIPINNISVTDNMSTYGIDSIGVVKATQKLSDFLGVPVAAIDVFTASCIQELANFSENLLLKSQPQLMSNSSHAPEAEFDSTEVDVSKSRQWGIRLLQLLALTYISIMLVSPAYLSITAFQSFIPNASESVYGMPWSNYLISLTLAPLSWILCMVSTCICISFFGNSFLRPNYALTPEISIYSMDFVKWWALYKTQEISSKVLATHLRGTVFLKYWFEMLGARIGSLVLLDTVDITDPSLVSIGDEVAISEGVLVQSHEVKNGILSFLPVRIGKNSSIGPYAVIQKGSVIKEGAEVHPLQKVEGGQHVLKPAKLNNVKEKAVLLVTTSKTQSNVMYHFLGIYLTGFLSSLAAAVAYILYIRFFQIPASFQHFSFVCICGAFHWIPFTIVAYATMFSDVPSNPIAFTISFTCAYLLHGLILTSLTCALTRLLKFNQNQTHFKTWLRHQLTISCHHRFAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSRIITGFHYSNGYACGKIEVQDNSVVGSQSLILPGSVVEKNVILGALSVAPMNSILREGSVYIGSQTRVAIRNSSGSLDERIEEMDMEYKKVVANLAANLAATTINAKARYFHRIGVSGKGHLKIYDKLEGIPLHKIFHPGKSYPVMVRHSNSLSADDDARIDARGAALRILSGAPDSNHVPVIDLTLKTGNAFYARTLADFASWLVCGLAAREELVKGTPRVREAVWNSLRHAHSYAELHYYSNICRLMRFTDGQEMYVKFKLRPIDTSISEDTGKVEPTGILPPETGAIPRDEHDARPLLFLAEDFQRRVNSPDGVRYVFQVQLRAVPDDEATRDLALDCTKPWDENEFPYIDVGEININESLSMEESDRLEFNPYLKSHELDVIPATSNTQSASIDHGRSLIYEICQHVRNRQPLPESWRNLVEQSNVKVDLSCCPVAAASLPKKEPKKVTLTLTRTWYQTFSALFTQPLLQTVLPYTVVGLAVFAPLNFVVNLKNVEKLPVQWLLPLFWVLSGVMAALACVVAKWVLVGRKKEGETVPLWSKRVVMDSTWQAIRTLVGDYFMDMASGSFLFVMWMKLMGADINMDGYVDSMGALLNPEMVKIERGGCVGREALLFGHIYEGDEGGMVKFGGIKIGEDGFVGSRAVVMPGVQMENEANLSALSLAMKGEIVRSR 2319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0391 2319 Gene3D Catalase core domain 1716 2064 - -
Ssu8g0391 2319 ProSitePatterns Phosphopantetheine attachment site. 1151 1166 IPR006162 -
Ssu8g0391 2319 ProSiteProfiles catalase family profile. 1683 2319 IPR018028 GO:0004096|GO:0006979|GO:0020037
Ssu8g0391 2319 Gene3D - 953 1080 IPR045851 -
Ssu8g0391 2319 ProSitePatterns Putative AMP-binding domain signature. 680 691 IPR020845 -
Ssu8g0391 2319 Pfam AMP-binding enzyme 525 958 IPR000873 -
Ssu8g0391 2319 SUPERFAMILY Trimeric LpxA-like enzymes 1593 1712 IPR011004 -
Ssu8g0391 2319 SUPERFAMILY Acetyl-CoA synthetase-like 493 1079 - -
Ssu8g0391 2319 Gene3D Hexapeptide repeat proteins 1587 1715 - -
Ssu8g0391 2319 PRINTS Adrenodoxin reductase family signature 23 45 - -
Ssu8g0391 2319 PRINTS Adrenodoxin reductase family signature 47 60 - -
Ssu8g0391 2319 SUPERFAMILY FAD/NAD(P)-binding domain 18 271 IPR036188 -
Ssu8g0391 2319 SUPERFAMILY ACP-like 1119 1202 IPR036736 -
Ssu8g0391 2319 Gene3D - 303 396 - -
Ssu8g0391 2319 SUPERFAMILY Trimeric LpxA-like enzymes 1344 1441 IPR011004 -
Ssu8g0391 2319 PANTHER AMINE OXIDASE 1 2319 - -
Ssu8g0391 2319 PANTHER AMP-BINDING ENZYME 1 2319 - -
Ssu8g0391 2319 Gene3D - 94 202 - -
Ssu8g0391 2319 SUPERFAMILY Heme-dependent catalase-like 1749 2056 IPR020835 GO:0020037
Ssu8g0391 2319 Pfam Flavin containing amine oxidoreductase 32 265 IPR002937 GO:0016491
Ssu8g0391 2319 CDD FAAL 499 1072 IPR040097 GO:0008610
Ssu8g0391 2319 Gene3D - 482 952 IPR042099 -
Ssu8g0391 2319 SUPERFAMILY Trimeric LpxA-like enzymes 2220 2316 IPR011004 -
Ssu8g0391 2319 Gene3D Hexapeptide repeat proteins 1357 1471 - -
Ssu8g0391 2319 Gene3D - 23 446 IPR036188 -
Ssu8g0391 2319 Gene3D - 1115 1195 IPR036736 -
Ssu8g0391 2319 ProSiteProfiles Carrier protein (CP) domain profile. 1122 1196 IPR009081 -
Ssu8g0391 2319 Pfam Phosphopantetheine attachment site 1128 1191 IPR009081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0391 Ssu-Chr8 6292019 6299815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0391 676 991 Monolignol Biosynthesis Gene Families AT1G20480 25.868 7.12e-19 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0391 - - cam:101501314 3922.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0391 8 6292019 6299815 Ssu8g0391 8 6292019 6299815 ECH
Ssu8g0391 8 6292019 6299815 Ssu3g2715 3 81168225 81184840 PCT