Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0376 ATGGATCACCAATCTGGCGAGGGATTTGATTCAGATGATAGTGACCTTGATATGCAAGCAGAAATTAGTGAGAAACATGAGAAAGTagatgaattttcaaaaaacctAGAATTATGTGGAAGTGAAGATGAAAAGTTTGTCGAACAATCTGTAGCAGACATTTCAACAGATATAGAAGCTGTAGAGCCATTCATAGGCATGGAGTTCAATTCAAGAGAGGAAGCCAGAGAATTCTACATTGCCTATGGTAGGCGGATAGGGTTTACAGTACGAATACACCATAACCGTCGTTCACGAGTAAATAACCAGGTTATTGGTCAAGATTTTGTCTGCTCAAAGGAAGGCTTTCGTGCAAAAAAGTATGTACACAGAAAAGATAGAGTGCTACCTCCTCCACCAGCCACCCGTGAAGGCTGTCAGGCCATGATAAGGTTGGCTTTACGGGATGGAGGGAAGTGGGTTGTCACCAAATTTGTGATGGAACATACTCACAAACTAATGAGTCCCAGTAAAGTTCCATGGCGAGGATCTGGAAAGCAGTTGGTTAGTGAGGATGAGAAAGATAAGAGAATCCGTGAGCTATCGCTTGAGTTGTACAATGAAAGGCAAAAGTGCAAACGACGTTGTGCTGCATATGAAGAGCAGTTAAATATGATTCTGAATGATTTAGAAAAGCACACAGAACACATCTCTGAAAAAGTTGCTGCTGTAGTACGAAGTATAAGAGAGATTGAGGGGGAAAAATCAGATTCAGATGGTGGGTAA 765 0.4065 MDHQSGEGFDSDDSDLDMQAEISEKHEKVDEFSKNLELCGSEDEKFVEQSVADISTDIEAVEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVMEHTHKLMSPSKVPWRGSGKQLVSEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNMILNDLEKHTEHISEKVAAVVRSIREIEGEKSDSDGG 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0376 254 MobiDBLite consensus disorder prediction 1 30 - -
Ssu8g0376 254 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 1 253 - -
Ssu8g0376 254 Pfam FAR1 DNA-binding domain 77 167 IPR004330 -
Ssu8g0376 254 Coils Coil 202 229 - -
Ssu8g0376 254 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0376 Ssu-Chr8 5975464 5977749 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ssu8g0376 FAR1 9.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0376 - - gmx:100810283 486.878