Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0355 ATGCAGCCGAAGCAAATTCATGAGATTAAAGACTTCCTTCTCACTGCGAGGAGGAAGGATGCACGGTCCGTGAAAATCAAGCGGAGCAAAGATGTGGTGAAGTTCAAGGTCCGTTGCTCCAAGTACCTGTACACCCTCTGTGTTTTTGATTCTGAGAAGGCTGATAAGTTGAAGCAATCACTTCCTCCAGGACGTGTGATTCTCACTGGTGTTGACGGATATCAGGCTTTGCTTTGGTTTTGGGAATTCATACTTAGTAAAACGGCtgagatttttctttttgttgttctttttttggGATCATGTTAG 309 0.4078 MQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGRVILTGVDGYQALLWFWEFILSKTAEIFLFVVLFLGSC 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0355 102 Gene3D - 2 68 IPR038464 -
Ssu8g0355 102 PANTHER BNACNNG77070D PROTEIN 3 67 - -
Ssu8g0355 102 Pfam Ribosomal L38e protein family 3 64 IPR002675 GO:0003735|GO:0005840|GO:0006412
Ssu8g0355 102 PANTHER 60S RIBOSOMAL PROTEIN L38 3 67 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0355 Ssu-Chr8 5771182 5771801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0355 3 64 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 95.161 3.14e-39 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0355 K02923 - var:108325348 129.413