Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0350 ATGGGGAGAATTATGTGTGTGGCTTTCCCACTAGTAGCTCTTGCAGTGGTGAGCATGTGTTATGGGATGGCAGACGCAGCGGTGAAACCTCCCCCGCCAAATTTGCGCTGGCATTATTATAAGATCACCAATACATGCCGCGACGCTGAGGAGTACGTTCGGCACGAAGTGAACCTGTTTTGGGAGCATGACAGAAGCATTACGGCAAAGCTCCTCCGCTTGGTTTATGCTGACTGTTTTGTCACTGGATGTGATGCGTCCATTCTGCTTGACGAAGGACCAAATCCAGAGAAAAAAGCATCACAAAACCGAGGGCTCGGAGGATTTGTGGCCATTAACAAGATCAAAACTGTTCTGGAATCACGATGCCCTGGAATTGTCTCCTGTGCTGATATACTCCACCTCGCCACCAGGGATGCCGTTCATCTGGCAGGTGGACCAGCTTACCCAGTTTTCACAGGAAGAAAGGATGGCATGCAATCAAATGCTGCATCAGTAGACCTACCATCCCCATCCATCTCGCTGCAGAAAGTTCTAGAATATTTTGAATCAAGGGGCTTGAATGAAGTAGACATGACTACACTTTTAGGAGCACACACAATGGGGCAAACACATTGTAGCTTTATTGTTGATCGGCTGTACAACTACAGTGGTTCTAAAAAACCCGACCCAAGCATGAATGCTTCTTGGCTAGAGACATTGAGAAAACTTTGCCCGCCAAGAAAGAACAGACATGACCCTCTGGTATACCTAAACCCTGAATCTGGATCAAGTTACAACTTCACAGAATCATACTACAGAAGGATCCTATCTCACGAAGCTGTACTGGGAGTTGATCAACAATTACTAAATGGTGATGACACTAAACAGATCACTGCAGAGTTCGCCATTGGATTTGAAGATTTTCGGAAATCTTTTGCTGAATCAATGTACAAGATGGGGAATTTCAAGGTTTTAATAGGAAACCAAGGAGAGATACGCCGAGATTGCCGATACACAAATAAGGGCAACTCAAATTAG 1020 0.4539 MGRIMCVAFPLVALAVVSMCYGMADAAVKPPPPNLRWHYYKITNTCRDAEEYVRHEVNLFWEHDRSITAKLLRLVYADCFVTGCDASILLDEGPNPEKKASQNRGLGGFVAINKIKTVLESRCPGIVSCADILHLATRDAVHLAGGPAYPVFTGRKDGMQSNAASVDLPSPSISLQKVLEYFESRGLNEVDMTTLLGAHTMGQTHCSFIVDRLYNYSGSKKPDPSMNASWLETLRKLCPPRKNRHDPLVYLNPESGSSYNFTESYYRRILSHEAVLGVDQQLLNGDDTKQITAEFAIGFEDFRKSFAESMYKMGNFKVLIGNQGEIRRDCRYTNKGNSN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0350 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Ssu8g0350 339 Gene3D - 39 334 - -
Ssu8g0350 339 Gene3D Peroxidase, domain 2 169 313 - -
Ssu8g0350 339 PANTHER PEROXIDASE 25-RELATED 20 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 CDD secretory_peroxidase 34 333 IPR033905 GO:0004601|GO:0042744
Ssu8g0350 339 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 PANTHER PEROXIDASE 61-RELATED 20 332 - -
Ssu8g0350 339 SUPERFAMILY Heme-dependent peroxidases 42 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 Pfam Peroxidase 54 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g0350 339 ProSiteProfiles Plant heme peroxidase family profile. 34 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0350 Ssu-Chr8 5716227 5717911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0350 9 334 Peroxidase AT5G24070 65.455 4.55e-161 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0350 K00430 - gmx:100797875 593.964