Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0332 ATGGCGTACCAGACCCCCGATCAGGACTCAAGATCCGAATCGAAGACCCCAACGCGGCTCTACAACCCCTACAAGGACCTCGAAGTCCCCATCCGCAACCTCTACCAGCTCCCAACCTCCCCGGAGTACCTCTTCGTCGAGGAGGCCCGCCGCAAGCGCCGCTCCTGGGGCGAGAACCTCACCTTCTACACCGGCTGCGGCTATCCTCGCCGGTGCAGTCGGCGGCGCCGCCTCCGGCCTCGTCGACGGCGTCAAATCCTTCGAGTCCGGCGACACCGCCAAGCTCCGCGTCAACCGCGTCCTCAACTCCTCCGGCCACGCCGGCCGCGCCTGGGGAAACCGCCTCGGCGTCATCGGCCTCCTCTACGCCGGCATCGAGAGCGGGATCGTGGCGGCCAGGGACACCGACGACGTGTGGAACAGCGTCGCGGCGGGACTCGGCACCGGCGCGCTGTATCGCGCGGCCAGAGGGGTGCGATCGGCGGCGGTGGCAGGCGCCGTCGGCGGCGTCGTGGTTGGAGTCGCCGTCACGGCGAAGCAGGCGTTGAAACGCTACGTGCCTATTTGAGAACGTCGCTTTGTATGagctcttaa 594 0.67 MAYQTPDQDSRSESKTPTRLYNPYKDLEVPIRNLYQLPTSPEYLFVEEARRKRRSWGENLTFYTGCGYPRRCSRRRRLRPRRRRQILRVRRHRQAPRQPRPQLLRPRRPRLGKPPRRHRPPLRRHRERDRGGQGHRRRVEQRRGGTRHRRAVSRGQRGAIGGGGRRRRRRRGWSRRHGEAGVETLRAYLRTSLCMSS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0332 197 MobiDBLite consensus disorder prediction 1 19 - -
Ssu8g0332 197 MobiDBLite consensus disorder prediction 161 175 - -
Ssu8g0332 197 MobiDBLite consensus disorder prediction 74 132 - -
Ssu8g0332 197 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE 5 68 - -
Ssu8g0332 197 MobiDBLite consensus disorder prediction 74 178 - -
Ssu8g0332 197 PANTHER TIM23 5 68 IPR045238 GO:0022857
Ssu8g0332 197 MobiDBLite consensus disorder prediction 140 154 - -
Ssu8g0332 197 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0332 Ssu-Chr8 5527687 5528280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0332 10 68 Chloroplast and Mitochondria Gene Families AT1G17530 63.934 2.37e-22 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0332 K17794 - gmx:100777112 141.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0332 8 5527687 5528280 Ssu4g3187 4 80673231 80673784 PCT