Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0293 ATGAGGATCAAACACATAAATCAACTTCCATTAGGCACTCTTGGATGGCCTTTTATCGGTGAAACCATTGAATTTGTTTCTTGTGCTTACTCTGATCGCCCTGAGAGCTTCATGGACAAGCGAAGCCACTTGTATGGCAAGGTGTTTAAGTCGCACATATTTGGAAGCCACACTATTGTTTCCGTGGATACAGatgtcaacaaatttatactgcaaagtGACGCAAAGGTTTTCGTTCCTTCTTATCCCAAGTCTCTGACCAAGTTGATGGGGGAGTTTTCAATTTTGCTCATCAATGGAAGCCTACAAAGGAGAATACATGGACTTGTTGGAGCTTTCTACAAGTCTCAACAGCTTAAGGCTCAAATCACTAGAGATATGCAGGAGTATGTTCAAGAATCCATGGCAAATTGGAGGGAGGACCAACCAATATACATACAAGATGAAACCAAAAATATCGCCTTTCAAGTACTGGTCAAGGCACTGATTAGTTTGAATCCAGGTGAAGAAATGGAGCTTCTGATGAAACAGTTTCAGGAATTCATCTCTGGTCTCATGTCTTTACCAATAAACCTTCCAGGAACTAAACTTTATCAATCTTTACAGGCAAGTCCATTAATTagatgttTGCAGAGAACTATTCAATTTAGAAGAAATAGTGGCATCTCTAGAGTACCAAAAGATGTAGTAGATGTGCTTCTGAATGACACAAGTGAGCTTTTAACGGATGATTTAATAGCAGATAATATAATCGATATGATGATTCCAGGAGAGGACTCGGTTCCAGTTCTTATGACTCTAGCTATCAAGTATCTATCAGAGTGCCCTGCTGCTTTGCAACAAATCACGGAAGAAAATGTGAAGCTTAAGAAACTCAAAGATCAACTTGGGGAGCCCTTGAGTTGGAGCGATTATTTATCATTGCCGTTTACTCAAACAGTTATAATGGAAACTTTGAGGATGGGAAATATAATAACTGGTGTTATGAGAAAGGCCATGAAAGATGTTGAAATAAAAGGGTATCTGATACCAAAAGGATGGTgtgcttttgtatattttagatcagTTCATCTAGATGACAAAAACTATGACCGACCTTACCAATTCAATCCATGGAGGTGGCAAGACAAAGACATGAGCAGTTGCAATTTCACTCCTTTTGGAGGGGGACAAAGGCTGTGCCCTGGCCTTGAGTTGGCCAGGCTGGAAGCTTCTATTTTCCTTCACCATTTTGTTACTCAATTTAGGTGGTATGCTAAAGAAGATACAATTGTGAACTTCCCCACTGTAAGAATGAAAAGGAGGATGCCGATCTTGGTGAGAAGATCGTGGAACGTTGAGTTGCCATGA 1350 0.3881 MRIKHINQLPLGTLGWPFIGETIEFVSCAYSDRPESFMDKRSHLYGKVFKSHIFGSHTIVSVDTDVNKFILQSDAKVFVPSYPKSLTKLMGEFSILLINGSLQRRIHGLVGAFYKSQQLKAQITRDMQEYVQESMANWREDQPIYIQDETKNIAFQVLVKALISLNPGEEMELLMKQFQEFISGLMSLPINLPGTKLYQSLQASPLIRCLQRTIQFRRNSGISRVPKDVVDVLLNDTSELLTDDLIADNIIDMMIPGEDSVPVLMTLAIKYLSECPAALQQITEENVKLKKLKDQLGEPLSWSDYLSLPFTQTVIMETLRMGNIITGVMRKAMKDVEIKGYLIPKGWCAFVYFRSVHLDDKNYDRPYQFNPWRWQDKDMSSCNFTPFGGGQRLCPGLELARLEASIFLHHFVTQFRWYAKEDTIVNFPTVRMKRRMPILVRRSWNVELP 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0293 449 PRINTS E-class P450 group I signature 312 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0293 449 PRINTS E-class P450 group I signature 42 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0293 449 PRINTS E-class P450 group I signature 352 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0293 449 PRINTS E-class P450 group I signature 384 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0293 449 PRINTS E-class P450 group I signature 394 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0293 449 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 6 438 - -
Ssu8g0293 449 PANTHER CYTOCHROME P450 26 6 438 - -
Ssu8g0293 449 Pfam Cytochrome P450 10 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0293 449 Gene3D Cytochrome P450 2 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0293 449 PRINTS P450 superfamily signature 81 94 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0293 449 PRINTS P450 superfamily signature 385 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0293 449 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0293 449 PRINTS P450 superfamily signature 313 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0293 449 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 387 396 IPR017972 GO:0005506|GO:0016705
Ssu8g0293 449 SUPERFAMILY Cytochrome P450 7 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0293 Ssu-Chr8 5011308 5015609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0293 5 416 Cytochrome P450 AT3G13730 65.072 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0293 K12638 - gmx:100797868 759.985