Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0289 ATGGTTGCAGTCAGCTATATTGATGAAGGGTTCATCTCAATTGCATCCTTGATGCTAGGTGTTGGAGCTATTCAGAAAAGCCTTATATCCATGGATCTTATTGGTTTAGCAAGAATAATTACCAGGACATGTATCATGGCAATTGTGGAGTTTACCTCTATGGCCATGGAGTTAGTGCTAGCAACTTATTTCCTAAGAGATATTAAGATTAGGATGATTGTTATCGCTTTTATGTCTACCGTGGCAACGTTGGCACTTGGAGGGGTAGAAGCGGTGCTTGCAAAAACTCCAATGAAAAAGTCATGTGTGAAAGTGCTCATTGGAGGCaagGTGTCGTTACACATCATAGCATAA 354 0.404 MVAVSYIDEGFISIASLMLGVGAIQKSLISMDLIGLARIITRTCIMAIVEFTSMAMELVLATYFLRDIKIRMIVIAFMSTVATLALGGVEAVLAKTPMKKSCVKVLIGGKVSLHIIA 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0289 117 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 7 55 - -
Ssu8g0289 117 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 59 115 IPR008217 GO:0005384|GO:0030026
Ssu8g0289 117 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 7 55 IPR008217 GO:0005384|GO:0030026
Ssu8g0289 117 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 59 115 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0289 8 115 Nodulin-like Gene Family AT3G43630 29.530 1.84e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0289 K22736 - gmx:100817158 81.6481