Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0246 ATGGCATCCCTTTTGGTCGTCCTTTGTACTTGTGTGATCGTTTTCATGGCTACCGCGAATACTTGTGTTGAAGCTGGCAGGCAATTCAAAGTTGGTGGTCGCTTTGGCTGGCATGAACCTGGCCCCAACAATACTGAATTTTATAGCCAATGGGCTGAAAGGAACAGATTTCAAATTGGTGATGCTCTTGTTTTTGAGTACCAGAATGACTCAGTTCTTAGTGTGGAGAAATGGGATTACATAAATTGTGACGCAAGTAACCCCATCACTGCCTTTGACAATGGGAAGAGCACTTTTAATCTTGACAGGCCTGGGGACTTCTACTTCATCAGTGGAACCGATGATCACTGCAAGAATGGGCAAAGATTACTTGTGGATGTGATGCACCCACATCCTATTCTTAAATCTCCACCGCCCATTTCCCTTCCACCTGAAGGCTTTCCACCAATGGCTCCTCCACCTTCTGATCAGAGCTTAGAGCTTTCATCAGCCTCCCTGGTGCttacttcaatttttatgtCCCCTTTGGTCACATTTGTTAGTGTGATGCTGTTAGCACCCTGA 564 0.4486 MASLLVVLCTCVIVFMATANTCVEAGRQFKVGGRFGWHEPGPNNTEFYSQWAERNRFQIGDALVFEYQNDSVLSVEKWDYINCDASNPITAFDNGKSTFNLDRPGDFYFISGTDDHCKNGQRLLVDVMHPHPILKSPPPISLPPEGFPPMAPPPSDQSLELSSASLVLTSIFMSPLVTFVSVMLLAP 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0246 187 Pfam Plastocyanin-like domain 45 121 IPR003245 GO:0009055
Ssu8g0246 187 Gene3D - 27 134 IPR008972 -
Ssu8g0246 187 PANTHER EARLY NODULIN-LIKE PROTEIN 2 12 173 - -
Ssu8g0246 187 CDD OsENODL1_like 27 128 IPR041846 -
Ssu8g0246 187 PANTHER BLUE COPPER PROTEIN 12 173 IPR039391 GO:0009055
Ssu8g0246 187 ProSiteProfiles Phytocyanin domain profile. 27 129 IPR003245 GO:0009055
Ssu8g0246 187 SUPERFAMILY Cupredoxins 26 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0246 Ssu-Chr8 3630296 3631264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0246 3 148 Phytocyanin Superfamily AT1G79800 51.370 1.36e-49 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0246 - - gmx:100783893 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0246 8 3630296 3631264 Ssu8g0246 8 3630296 3631264 ECH