Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0243 ATGGGATATGTTCACATCGATGATGTTGCACTTTGCCACGTCCTTGTTTACGAAAATGAAGCTTCCCATGGTCGATACCTTTGCAGCTCTACCGTAATGGATGAAGACGAATTGGCTGCATTGCTAGCTAACCGTTATCCTACCCTCCCCATCTCCAAAAGtttCGAGAAACTAGATAGACCACATTATGAACTAAACACTGGAAAGCTGAGGAGTCTAGGATTCAAGTTCAAGTCTATTGAAGAAATGTTTGATGATTGCATTGCATCGCTTGTGAAGCAAGGCCATCTCAGCTCTTCACCAAGGCCACGGTCCAATTTAGTTGAGATTGTACTCTGA 339 0.4336 MGYVHIDDVALCHVLVYENEASHGRYLCSSTVMDEDELAALLANRYPTLPISKSFEKLDRPHYELNTGKLRSLGFKFKSIEEMFDDCIASLVKQGHLSSSPRPRSNLVEIVL 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0243 112 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 97 - -
Ssu8g0243 112 PANTHER OS08G0515900 PROTEIN 1 97 IPR033267 GO:0009555|GO:0080110
Ssu8g0243 112 Gene3D - 1 111 - -
Ssu8g0243 112 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 95 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0243 Ssu-Chr8 3597598 3598920 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0243 1 98 Monolignol Biosynthesis Gene Families AT1G15950 33.663 1.50e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0243 - - aprc:113856010 188.348