LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu8g0241	ATGACCGAAACAAGGTGTCACGAAACTCCTAGCAGCAGCACCAGCAACTCCTCCACTTCAAAACCCCAGAAAACAGAGCCCCAAAAACAGAGCAACGCAAAGAGAGGCAGAGACCCCAGCAAGCACCCGGTTTACCACGGGGTGCGAATGCGCAACTGGGGCAAGTGGGTGTCCGAAATTCGCGAGCCACGCAAGAAATCACGCATCTGGCTCGGCACTTTCGCCACGCCTGAAATGGCGGCACGTGCGCACGACGTTGCGTCTCTGAGCATAAAAGGCCACACAGCGATTCTCAACTTTCCAAACATAGCGAGCATGCTTCCCAGACCCATCACGTTGACGCCACGTGACATCCAAGCCGCCGCCGCGGAAGCCGCCGCGATGGTGGAATTCGACCGTGACGGTTCGGAGGCGGAGGAGCTGAGTCAGATTGTGGAGCTGCCCAACATAGAAGAGAGCTTCGACTCGGTGGACTCGAGAACTGAGTTCGCGTTGACCGACTCGGTGGATAGTTGGGTGTACCCTCCAACGCCGGTGGGGAGCATTTGGGAACAAAGTTTTATGATGGAGAGTTCTGAGTGTGGATTCCAATTTGGGAATGATCACCAACAAAAAACATGTTCGGTTTAA	630	0.5492	MTETRCHETPSSSTSNSSTSKPQKTEPQKQSNAKRGRDPSKHPVYHGVRMRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVASLSIKGHTAILNFPNIASMLPRPITLTPRDIQAAAAEAAAMVEFDRDGSEAEELSQIVELPNIEESFDSVDSRTEFALTDSVDSWVYPPTPVGSIWEQSFMMESSECGFQFGNDHQQKTCSV	209

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ssu8g0241	209	PRINTS	Ethylene responsive element binding protein signature	45	56	IPR001471	GO:0003700\|GO:0006355
Ssu8g0241	209	PRINTS	Ethylene responsive element binding protein signature	67	83	IPR001471	GO:0003700\|GO:0006355
Ssu8g0241	209	MobiDBLite	consensus disorder prediction	1	47	-	-
Ssu8g0241	209	ProSiteProfiles	AP2/ERF domain profile.	44	101	IPR001471	GO:0003700\|GO:0006355
Ssu8g0241	209	Gene3D	AP2/ERF domain	44	103	IPR036955	GO:0003700\|GO:0006355
Ssu8g0241	209	MobiDBLite	consensus disorder prediction	28	45	-	-
Ssu8g0241	209	CDD	AP2	45	102	IPR001471	GO:0003700\|GO:0006355
Ssu8g0241	209	SMART	rav1_2	44	107	IPR001471	GO:0003700\|GO:0006355
Ssu8g0241	209	MobiDBLite	consensus disorder prediction	1	27	-	-
Ssu8g0241	209	SUPERFAMILY	DNA-binding domain	44	101	IPR016177	GO:0003677

Showing 1 to 10 of 13 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu8g0241	Ssu-Chr8	3557873	3558502	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ssu8g0241	13	176	AP2-EREBP Transcription Factor Family	AT5G11590	53.646	5.40e-62	191

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2 or ERF-ERF	Ssu8g0241		AP2	3.9e-13	CL0081

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu8g0241	K09286		-	gmx:100784419	321.627

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ssu8g0241	8	3557873	3558502	Ssu8g0241	8	3557873	3558502	ECH

Showing 1 to 1 of 1 entries