Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0208 ATGAACGGTGCAGGGAGACAGGGGCTGAGATCTGGTGCGGCAGGGGTGCACCACCAGCGCCAGTACTCCGATCACTTCCTCGACGGATCCTCCAACGGCAACAGGTGGCTCCAATCGGCTGGCCTTCAACACCTTCAATCCTACGCCAATCCCCTCCCTCCGCTTCAGGACTATAACTTGTAcggcggtggtggtggcggcggcgcGCAGGGAGGAAGAATGTACCGGAATGCGCAGAGGAGCTTTAATGGAGGAAATGAGTATTATATGGAGCCTTCCACGCCTCCCGGTGGTTACCGTGCTTCGATGCAGAAAAAGAATGGAGAAGATTCGCCCGGTGATTTCAGCCCCGGCTTGCTGGATCTGCATTCGTTCGACACCGAGCTTCTTCCTCCCGAGATGCCAGCCTCCAATGCATATGATATCAACTCCCTGCATCAACCTGGCCGGGGTAGAAGCTTTGATGACTCTGAACCTTACATGTTGAGCAAACAGACAGGCAGAGCTCGTGCTCCTGAAAACATATTGAAAAGTTTTCCTGCAGACAAAGAGAAATCTAATTCTGTAGCAAAGATTAAAGTTGTGGTTCGTAAGAGACCAATGAATAAGAAGGAATTAGCAAAAAATGAGGAAGATATTATAGAAACGTATTCCAATTCTTTAACAGTGCACGAGACTAAACTGAAGGTTGACCTAACTCAGTATGTAGAAAAGCATGAATTCATTTTTGATGCTGTTTTGAATGAAGAGGTTACGAATGATGAGgTGTATCGTGAAACAGTAGAGCCCATAGTTCCAATAATCTTTGAACGCACTAAGGCAACTTGCTTTGCATACGGGCAAACAGGAAGTGGAAAAACTTACACAATGAAGCCACTGCCACTTAAAGCATCGAGGGACATCCTTAGATTGATGCATCATACTTACAGGAACCAGGGTTTTCAATTGTTTGTGAGCTTCTTTGAAATATATGGTGGCAAGCTTTTTGATCTCCTTAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAGTACCGAGTATCGGATGTGGAGAATATCAAAGAACTGATTGAGAAAGGAAGTTCCACAAGAAGTACAGGCACCACGGGTGCAAATGAGGAATCGTCACGGTCGCATGCAATACTTCAGCTTGCTATCAAGAGGTCAGTTGATGGCAATGAATCCAAACCCCCCCGTTTGGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGCGAACGTGGAGCAGATACCACAGATAATGATAAACAGACAAGAATAGAAGGTGCTGAAATCAATAAGAGTTTACTTGCCCTAAAGGAATGCATAAGAGCTCTTGACAATGACCAAGGACACATCCCTTTCAGAGGCAGTAAACTGACTGAAGTTTTGAGGGATTCCTTTGTTGGCAATTCCCGCACCGTTATGATATCATGTATATCACCAAGCTCTGGTTCATGCGAACATACTCTGAATACATTGCGATATGCTGACAGGGTAAAAAGCCTATCGAAAGGGAACATTTCAAAGAAGGATGttttaacatcaaatttcaACCTTAAAGAATCAAGTACAGTTCCCTTATCTTCCGTTACTGGGTCAGTCTATGAGGATCGCATGACAGATGGATGGCCTGATGAAAATGAAGGGGATGATTTTAGTCCCCCTGAAGAGTATTACGAGCAGGTGAAACCATCtttgaagaaaaatggaaaGATGGAGTCATATGCTACAATAGATGACAAATTGAACAAACCCAGTGGTCAGATCAAATGGAAGGACCTCCCAAAAGTTGAGCGTCAAACCACACACACTGAGGATGATTTAAATGCCCTCTTACAGGAAGAAGAGGACCTTGTAAATGCTCACCGGACACAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAGATGAACCTCTTGGTTGAAGCAGATCAACCAGGGAATCAGCTGGATGATTATATAACAAGACTAAATGCCATTCTTTCTCAGAAGGCTGCTGGCATCCTGCAGTTGCAAACCCGTTTAGCTCATTTTCAGAAACGTTTAAAGGAGCATAATGTTTTGGTATCATCTACTGGTTACTAA 2121 0.4309 MNGAGRQGLRSGAAGVHHQRQYSDHFLDGSSNGNRWLQSAGLQHLQSYANPLPPLQDYNLYGGGGGGGAQGGRMYRNAQRSFNGGNEYYMEPSTPPGGYRASMQKKNGEDSPGDFSPGLLDLHSFDTELLPPEMPASNAYDINSLHQPGRGRSFDDSEPYMLSKQTGRARAPENILKSFPADKEKSNSVAKIKVVVRKRPMNKKELAKNEEDIIETYSNSLTVHETKLKVDLTQYVEKHEFIFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVENIKELIEKGSSTRSTGTTGANEESSRSHAILQLAIKRSVDGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNISKKDVLTSNFNLKESSTVPLSSVTGSVYEDRMTDGWPDENEGDDFSPPEEYYEQVKPSLKKNGKMESYATIDDKLNKPSGQIKWKDLPKVERQTTHTEDDLNALLQEEEDLVNAHRTQVEETMNIVREEMNLLVEADQPGNQLDDYITRLNAILSQKAAGILQLQTRLAHFQKRLKEHNVLVSSTGY 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0208 706 Pfam Kinesin motor domain 197 513 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu8g0208 706 MobiDBLite consensus disorder prediction 369 389 - -
Ssu8g0208 706 Gene3D Kinesin motor domain 170 517 IPR036961 -
Ssu8g0208 706 MobiDBLite consensus disorder prediction 85 159 - -
Ssu8g0208 706 MobiDBLite consensus disorder prediction 370 389 - -
Ssu8g0208 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 514 IPR027417 -
Ssu8g0208 706 ProSitePatterns Kinesin motor domain signature. 413 424 IPR019821 GO:0003777|GO:0005524|GO:0007018
Ssu8g0208 706 CDD KISc_KIF2_like 191 512 - -
Ssu8g0208 706 PANTHER KINESIN-RELATED PROTEIN 6 1 706 - -
Ssu8g0208 706 PRINTS Kinesin heavy chain signature 414 432 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu8g0208 706 PRINTS Kinesin heavy chain signature 464 485 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu8g0208 706 PRINTS Kinesin heavy chain signature 380 397 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu8g0208 706 PRINTS Kinesin heavy chain signature 271 292 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu8g0208 706 ProSiteProfiles Kinesin motor domain profile. 191 514 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu8g0208 706 PANTHER KINESIN-LIKE PROTEIN KIN-13B 1 706 - -
Ssu8g0208 706 SMART kinesin_4 189 520 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0208 Ssu-Chr8 3098745 3103526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0208 191 514 Calmodulin-binding Proteins AT5G65930 34.431 5.66e-45 172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0208 8 3098745 3103526 Ssu8g0208 8 3098745 3103526 ECH