Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0207 ATGGAATTTTGGCCAGAATTTCTTGCGAGCAGTACGGGTAAAGAGTTTGTAGCTGGAGGGTTTGGAGGCACTGCTGGCATAATCTCTGGTTACCCATTAGACACGCTCCGCGTCATGCAACAGAGCTCCAACAATGGCTCTGCCTTCACCATCCTTAGAAATGTGGTGGCCAAGGAAGGACCAGCGGCTCTGTACCGTGGAATGACTGCTCCTTTGGCCTCTGTTACCTTTcagAACGCTATGGTTTTCCAAATTTATGCCGTTCTCTCGAGGGCATTTAGCTCGTCCGTTTCCGTTAACGAACCTCCTTCTTACAAGGGTGTTGCTTTGGGAGGATTTTGTTCTGGCGCTTTGCAGAGTATGTTGCTCTCCCCtgttgaattagttaaaattcGCCTTCAGCTGCAGAACACGGGCCAGGGCCCATCCACAGAAACCCAAAAAGGTCCCGTAAGGGTCGCCGAGAACATATGGAAAAGAGAGGGTCTTCGTGGCATTTATCGAGGACTTGGCATCACTATGCTAAGAGATGCACCTGCACATGGCCTCTACTTTTGGACATACGAATACGCGAGGGAGAAACTTCACCCTGGTTGCAGAAAAAGTTGTGAAGAGAGCTTGAATACTATGCTAGTAGCAGGAGGATTAGCGGGGGTTGTGAGTTGGGTTTTCAGCTACCCTTTAGACGTTATAAAGACTAGATTGCAGGCTCAGACACTTTCTTCACGGAAATACAATGGCATTTTGGATTGCCTTCGAAAGAGTATTAAAGAGGAAGGATACGTGGTGCTGTGGCGGGGCTTAGGGACTGCGGTTGCTAGAGCGTTTGTAGCGAACGGTGCTATATTTTCTGCTTATGAGATCACTCTAAGGTGTCTGTTTGATAAATAA 891 0.4714 MEFWPEFLASSTGKEFVAGGFGGTAGIISGYPLDTLRVMQQSSNNGSAFTILRNVVAKEGPAALYRGMTAPLASVTFQNAMVFQIYAVLSRAFSSSVSVNEPPSYKGVALGGFCSGALQSMLLSPVELVKIRLQLQNTGQGPSTETQKGPVRVAENIWKREGLRGIYRGLGITMLRDAPAHGLYFWTYEYAREKLHPGCRKSCEESLNTMLVAGGLAGVVSWVFSYPLDVIKTRLQAQTLSSRKYNGILDCLRKSIKEEGYVVLWRGLGTAVARAFVANGAIFSAYEITLRCLFDK 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0207 296 SUPERFAMILY Mitochondrial carrier 12 287 IPR023395 -
Ssu8g0207 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 194 IPR018108 -
Ssu8g0207 296 Gene3D Mitochondrial carrier domain 10 296 IPR023395 -
Ssu8g0207 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Ssu8g0207 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 205 292 IPR018108 -
Ssu8g0207 296 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 295 - -
Ssu8g0207 296 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Ssu8g0207 296 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Ssu8g0207 296 PRINTS Mitochondrial carrier protein signature 167 185 IPR002067 GO:0055085
Ssu8g0207 296 PRINTS Mitochondrial carrier protein signature 214 236 IPR002067 GO:0055085
Ssu8g0207 296 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Ssu8g0207 296 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 295 - -
Ssu8g0207 296 Pfam Mitochondrial carrier protein 109 195 IPR018108 -
Ssu8g0207 296 Pfam Mitochondrial carrier protein 210 295 IPR018108 -
Ssu8g0207 296 Pfam Mitochondrial carrier protein 11 95 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0207 Ssu-Chr8 3091598 3094667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0207 1 296 Antiporters AT1G79900 70.370 7.64e-145 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0207 K15109 - gmx:100812034 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0207 8 3091598 3094667 Ssu8g0207 8 3091598 3094667 ECH