Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0191 ATGCCCAAGAAGATTCGAGATTACCTCTTCAAAATCAAAAGCCCTCGCCCTCAAATCCGATTTAACTCGTTATCCTCTAAGAACTGGAATATTCTCTCTGGCTGCAAGCATCCGAGGACACCTTCCTTTGCCTTATACGCTGGTAGAAACGAAGCTAATCATGtcggcaacaacaacaatcaccACAAGAACGATGCAGCCACCCTGGCAGACATAGACCGTTTCCTCTTCGAGAACTTCAAGTCTCTATACCTTAAAGACGACGAAGAAGAAAACGAAAACACCAAAAGGGTCTTTGAAGATGAAAAGCACGAGGTGGAAGAAGGTCCCATGACGGTGGAAACGCCACGTCATGTTCGTGGGTCCACCCGGTTCTCCGTGAAGCCAGGGTTCTCGGGGTCACTGGTGGAGCATGTAATTACAACAAGTGACGAAGCAGGTTCGATCTCAACCATCTCAACCCTCAATgatatttcatcttcaaatTCTTATGACGAAACTGCAAAGGAGACTATGGATCACGCTCTTCCGGATAATAGCATCGCTCTCTTGACGCACTCGACGAGCCCCTACGAGGACTTCAGGCGTTCCATGCAGGAAATGGTGAATAACCATGAAAGAGTGGTTGATTGGGATTTCATGGAGGAGCTGTTGTTTTGTTACCTTAACCTCAATGAGAAAAAATCGCACAAGTTCATTATCAGTGCTTTCGTCGATCTCATCACCGTCATGCGTCGGAATGATACCGAGACAGCTTCGGCCAAGCCACGTAGCGTTCGAACGGTTAGGACTGGTCGAGAGTTAAGGAATAATAATTAA 819 0.4481 MPKKIRDYLFKIKSPRPQIRFNSLSSKNWNILSGCKHPRTPSFALYAGRNEANHVGNNNNHHKNDAATLADIDRFLFENFKSLYLKDDEEENENTKRVFEDEKHEVEEGPMTVETPRHVRGSTRFSVKPGFSGSLVEHVITTSDEAGSISTISTLNDISSSNSYDETAKETMDHALPDNSIALLTHSTSPYEDFRRSMQEMVNNHERVVDWDFMEELLFCYLNLNEKKSHKFIISAFVDLITVMRRNDTETASAKPRSVRTVRTGRELRNNN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0191 272 Coils Coil 85 105 - -
Ssu8g0191 272 ProSiteProfiles OVATE domain profile. 183 243 IPR006458 -
Ssu8g0191 272 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 254 IPR038933 GO:0045892
Ssu8g0191 272 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 181 243 IPR006458 -
Ssu8g0191 272 MobiDBLite consensus disorder prediction 249 272 - -
Ssu8g0191 272 Pfam Transcriptional repressor, ovate 187 242 IPR006458 -
Ssu8g0191 272 PANTHER TRANSCRIPTION REPRESSOR OFP14 3 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0191 Ssu-Chr8 2863115 2863933 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ssu8g0191 Ovate 4.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0191 - - vra:106761610 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0191 8 2863115 2863933 Ssu8g0191 8 2863115 2863933 ECH
Ssu8g0191 8 2863115 2863933 Ssu4g3375 4 84162102 84162887 PCT