Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0184 ATGGGTGTTAACTCCAACAGAGTGGAACACTTCGATAGCCACGAAACCACCATCAAAATCCAAGCCGAGACGACGCCAATGCCATCATTGCAAATCCATGCAGTGCAGTTGCCACCGCAGAGAACCACACTCCACAAATTGAGACACAGAGTCTCCGAAATCTTCTTCCCAGACGACCCACTCTACCGTTTCAAGAACCAAAGTTGGTTCAAAAAGTTGCTTCTCGCGGTTCAATATTTGTTCCCCATTTTCCAATGGGCTCCTCACTACGACCTCACCCTTCTCCGCTCTGACCTCATCTCTGGCCTCACCATTGCCAGCCTAGCCATTCCTCAGGGAATCAGTTATGCCAAGCTTGCAAACTTGCCACCTATTGTTGGActatATTCAAGTTTTGTGCCCCCATTGATATACTCCTTGCTTGGAAGTTCTAGACATCTTGGTGTTGGACCTGTTTCGATTGCGTCTTTGGTTATGGGATCAATGTTAAGTGAGACAATTTCCTACACTCAGGACCCAATTCTCTATCTGGGATTGGCTTTCACTGCAACTTTCTTTGCTGGTGTATTCCAAGCTGCTCTGGGTATATTAAGGTTAGGCTTTGTGATTGATTTTCTGTCGAAGGCAACGCTGGTTGGATTCACGGGCGGTGCTGCCATCATTGTGTCACTGCAGCAGCTGAAAGGTTTACTTGGAATAGTGCACTTTACTAGCAAGATGCAAATAGTTCCTGTAATGGTCTCTGTTTTCAAGCAAAGACACGAGTGGTCATGGCAAACCATTCTTTTGGGATTCGGCTTCCTGGCCTTCCTGCTGACAACAAGGCACATTAGCTTGAAGAAACCAAAACTATTCTGGGTTTCAGCAGCTGCCCCATTGACATCAGTTATTCTGTCAACCATTTTAGTCTTTCTTCTGAGAAATAAGACTAATCAAATTTCAGTTATCGGACACTTACCAAAGGGAGTTAATCCACCATCATCAAACATGTTATACTTCAATGGTCCTTACTTGGCTCTTGCTATCAAAACTGGCATCATCACAGGGATCTTATCTCTCACTGAAGGAATTGCAGTAGGTAGAACATTTGCATCACTTAAGAACTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTGTAATGAACATAGCTGGCTCTTGTTCTTCATGTTATGTTACAACAGGATCCTTTTCTCGATCAGCTGTTAACTATAATGCCGGAGCACAGACAACAGTTTCAAATATAATCATGGCCGCAGCTGTTCTAGTGACCCTTTTGTTTCTCATGCCTCTGTTCTACTATACACCAAATGTTGTCTTGGCGGCCATTATCATCACTGCTGTGATTGGGCTAATAGATTATCAATCTGCATATAAATTGTGGAAGGTTGACAAACTTGATTTCTTGGCATGTTTGTGCTCTTTTTTCGGGGTTCTGTTCATTTCAGTGCCTTTAGGCCTTGGAATAGCGGTTGTAATATCAGTCCTCAAGATCTTGCTTCATGTCACTCGACCAAACACTTTGGTTTTGGGGAATATACCAGGAACACAAATATTCCATAACATAAACCAATACAAAGAAGCTTTAAGGGTTCCTTCATTTATCATTTTGGCTGTTGAGTCTCCAATCTATTTTGCTAACTCAACTTATCTTCAAGAAAGGATACTGAGATGGGTTCGAGAAGAGGAAGAGCATATAAAAGCCAATAATGGAGCTTCATTGAAGTGCATAGTTTTAGACATGACAGCTGTCACGGCCATAGACACAAGTGGGCTTGACACTTTATGTGAACTTAGAAAGATGCTGGAGAAGAGATCGCTTCAGCTTGTGTTGGCAAATCCTGTTGGAAATGTGATGGAAAAATTGCATAAGTCAGAAATTTTGGATACCTTTGGATTAAAAGGAGTCTATCTCACGGTGGGAGAAGCTGTGGCTGACATTTCATCGCTCTGGAAAGCTCAGCCTTGA 1974 0.4276 MGVNSNRVEHFDSHETTIKIQAETTPMPSLQIHAVQLPPQRTTLHKLRHRVSEIFFPDDPLYRFKNQSWFKKLLLAVQYLFPIFQWAPHYDLTLLRSDLISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSETISYTQDPILYLGLAFTATFFAGVFQAALGILRLGFVIDFLSKATLVGFTGGAAIIVSLQQLKGLLGIVHFTSKMQIVPVMVSVFKQRHEWSWQTILLGFGFLAFLLTTRHISLKKPKLFWVSAAAPLTSVILSTILVFLLRNKTNQISVIGHLPKGVNPPSSNMLYFNGPYLALAIKTGIITGILSLTEGIAVGRTFASLKNYQVDGNKEMMAIGVMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTTVSNIIMAAAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQSAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVVISVLKILLHVTRPNTLVLGNIPGTQIFHNINQYKEALRVPSFIILAVESPIYFANSTYLQERILRWVREEEEHIKANNGASLKCIVLDMTAVTAIDTSGLDTLCELRKMLEKRSLQLVLANPVGNVMEKLHKSEILDTFGLKGVYLTVGEAVADISSLWKAQP 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0184 657 PANTHER SULFATE TRANSPORTER 19 657 IPR001902 GO:0015301|GO:0016020|GO:0055085
Ssu8g0184 657 PANTHER SLC26A/SULP TRANSPORTER-RELATED 19 657 - -
Ssu8g0184 657 Gene3D STAS domain 506 651 IPR036513 -
Ssu8g0184 657 CDD STAS_SulP_like_sulfate_transporter 527 642 - -
Ssu8g0184 657 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Ssu8g0184 657 Pfam Sulfate permease family 95 474 IPR011547 GO:0016021
Ssu8g0184 657 Pfam STAS domain 527 645 IPR002645 -
Ssu8g0184 657 SUPERFAMILY SpoIIaa-like 532 648 IPR036513 -
Ssu8g0184 657 ProSiteProfiles STAS domain profile. 526 649 IPR002645 -
Ssu8g0184 657 TIGRFAM sulP: sulfate permease 82 645 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0184 Ssu-Chr8 2769983 2774396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0184 1 657 Inorganic Solute Cotransporters AT3G15990 76.024 0.0 1040
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0184 K17471 - gmx:100812617 1200.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0184 8 2769983 2774396 Ssu4g3380 4 84196128 84199645 PCT