Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0150 ATGGAAAACTTAAAAACACCATTCAAAGGTGTTATGAACGATCTTCGAGGAAGAGCCGTGTATTATAAAGATGATTGGACTTCTGGTCTCTATTCAGGAACTGGGATATTGGCCCCAACTACGTATATTTTCTTTGCTTCTGCTCTACCTGTTATTGCCTTCGGCGAGCAGCTGAGTAGAGACACAgATGGAAGCTTGAGCACGGTAGAAACACTGGCTTCTACAGCTATTTGTGGAATCATACACTCAATTTTGGGAGGCCAGCCTCTCCTAATAGTGGGAGTTGCTGAACCCACTATCATTATGTACACCTACTTGTACAACTTTGCCAAAGATAGGAATTCCTTGGGACGAGAACTCTTTTTAGGTTGGGCAGGATGGGTTTGTGTATGGACTGCTCTCTTGCTGTTTCTTCTAGCAATATTCAATGCTGGCAATATCATCAATAGATTTACAAGGATTGCGGGTGAGCTTTTTGGCATGTTGATCACAGTCTTGTTCATTCAACAGGCTATCAAGGGAATGGTAGGTGAGTTTAAAGTTCCTGAAGAGGGAGACCCAACATTGGAAAAGTACCAATTTCATTGGCTGTATGCAAATGGATTGCTGGGTATTATATTCACCCTTGGCCTTCTCTATACTTCTTTAAAAAGCAGAAGAGCGAGGTCATGGTTATATGGGACAGGGTGGTTCAGAAGTTTCATCGCAGACTATGGGGTCCCTTTCATGGTGGTGGTGTGGACAGGTCTATCATTCATAGTACCAAGTAAAGTGCCTTCTGGAGTTCCCAGAAGGCTCACTTCTCCTCTTGCTTGGGAGTCTACATCTTTACATCATTGGACAGTAATCAAAGATATGGGGGAGGTATCTCCGGCATATATTTTTGCTGCTTTTATTCCCGCCTTAATGATAGCGGGGCTTTACTTCTTTGATCATAGTGTTGCTTCCCAGATGGCACAACAGAAGGAATTCAATCTCAGGAAACCTTCTGCATACCACTATGACATATTGTTGCTAGGATTAACGACTTTGCTTTGTGGATTAATTGGCTTACCCCCTTCAAATGGAGTTCTGCCTCAATCCCCTATGCACACCAAGAGCCTGGCTGTTCTCAAGAAACAGtTGATCCGAAGAAAGATGGTTAAAAGTGCCAAGGAAAGCATAAGGCAGAAAGCTAGCAAGTCTGAAATCTATGGGAAGATGCAAGCAGTGTTTATAGAAATGGATAACTGTCCAGATAATCATTCAGTGGCCAAAGAACTAGAGGATTTGAAAGAGGTTGTCCTAAACGGTGAGGACAAAGGACTCAACAATAAGAGTACCTTTGATCCTGAGAAACACATTGATGCATATTTGCCTGTCAGAGTAAAGGAGCAGAGAGTGAGCAACCTTTTACAATCACTCCTTGTAGGAGCATCAGTCTTTGCTATGCCTGCCATAAAAAAGATACCATCTTCAGTTCTGTGGGGATATTTTGCTTACATGGCCATTGATAGTCTTCCAGGAAATCAATTCTGGGAAAGGATACTACTTCTTTTTGTAACACCTAGTAGGTGGTACAAGTTGTTGGAAGGGGATCATGCTTCCTTTGTTGAGTCGGTACCTTACAGATACATAGTTTTCTTCACACTCTTCCAATGTGTATATTTCTTGGTTTGTTTTGGAGTGACATGGATTCCCATAGCTGGAATTCTGTTCCCCTTGCCTTTCTTTTTGCTGATCACATTGAGGCAACATATACTCCCCAAGCTGTTCAAGCCTCACCATCTTAGGGAACTAGATGCGGCTGAATATGAAGAAATAGTTGGTGCTACAGTACTAAGTTTCAATAAATCTTTCAGGGAGGTGGAATCACCCCGAGTTGGATCAAAGGAAATAGGTGATGCTGAAATATTAGATGAGTTAACTACCAATAGAGGGGAGTTGAAGGTCAGAAATGTCAGCTTTGATGAGGAAAGAAATCGCCAGGTGTACCCTGATGAAAATGGATCCCCACTCACAGATTGTTAG 2010 0.4229 MENLKTPFKGVMNDLRGRAVYYKDDWTSGLYSGTGILAPTTYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSILGGQPLLIVGVAEPTIIMYTYLYNFAKDRNSLGRELFLGWAGWVCVWTALLLFLLAIFNAGNIINRFTRIAGELFGMLITVLFIQQAIKGMVGEFKVPEEGDPTLEKYQFHWLYANGLLGIIFTLGLLYTSLKSRRARSWLYGTGWFRSFIADYGVPFMVVVWTGLSFIVPSKVPSGVPRRLTSPLAWESTSLHHWTVIKDMGEVSPAYIFAAFIPALMIAGLYFFDHSVASQMAQQKEFNLRKPSAYHYDILLLGLTTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMVKSAKESIRQKASKSEIYGKMQAVFIEMDNCPDNHSVAKELEDLKEVVLNGEDKGLNNKSTFDPEKHIDAYLPVRVKEQRVSNLLQSLLVGASVFAMPAIKKIPSSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWYKLLEGDHASFVESVPYRYIVFFTLFQCVYFLVCFGVTWIPIAGILFPLPFFLLITLRQHILPKLFKPHHLRELDAAEYEEIVGATVLSFNKSFREVESPRVGSKEIGDAEILDELTTNRGELKVRNVSFDEERNRQVYPDENGSPLTDC 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0150 669 PANTHER ANION EXCHANGE PROTEIN 1 662 IPR003020 GO:0005452|GO:0006820|GO:0016020
Ssu8g0150 669 Pfam HCO3- transporter family 198 374 IPR011531 GO:0006820|GO:0016021
Ssu8g0150 669 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Ssu8g0150 669 Pfam HCO3- transporter family 454 544 IPR011531 GO:0006820|GO:0016021
Ssu8g0150 669 PANTHER BORON TRANSPORTER 4-RELATED 1 662 - -
Ssu8g0150 669 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0150 Ssu-Chr8 2184558 2188135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0150 1 661 Antiporters AT1G74810 70.420 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0150 K24194 - gmx:100811184 1257.28