Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0114 ATGGGCATATTCAGATGTGGAACCTTGCTTTTCTATGTGCTCCTTTTGTTTAGAACCTGCGTGGCCAATGATCAACACATTGGTCAGATATATCCTGGCTTCAGTGCTTCTCACCTGGATTGGAACGACCATAATGGTCTTTTCTTGCTATCCAACAGCTCAGTTTTCGCTTTGGGATTCTTTACTGCTCTTGATgtttcattgtttgttttagtAGTCATTCACTTAAGAAGCTACAAAGTGGTTTGGACTGCCAACAGAGGCTTACTCGTTGGGAATTCTGATAAATTTGTGTTTGACCGTAGTGGGAATGCATATTTGGAAAGTGGGAATGGTGTAGTTTGGGCAACGAACACAACAGGACAAAAAGTAAGAGCCATGGAATTGCTTGACTCAGGGAATTTGGTGTTGCGTGGGGAAAATGGGACAACTATTTGGCAAAGTTTTAGCCATCCCACTGATACCCTTTTGCCCGGACAAGCCTTTGTGGAAGGAATGACACTCAGAAGCTTTCACAACAGCATGAATTTGGTTCATTATCTTAGTTATATGGCAGGTGATTTGGTTCTCTATGCAGGATTTGAAACTCCACAAGTGTACTGGTCCCTATCAGAAGCCCAGAGAAGCTCAAAAAATAACACTGGTAAGGTTCACTCAGCGTCTTTGGTGTCCAATTCATGGTGTTTTTATGACAAAAATAGAGGTTTGCTATGGAAAACTTTCTTCTCTGACCACTCAGATCCCAAGTCATTGTGGGCTGCTACCTTGGACCCAAAAGGTGAAATCTCTTTTTATGATCTTAACAAAGGGAAGTCTCCTAACCCTGAGGCAGTCAAGGTACCACAAGACCCTTGTGGCATTCCTGAGCCTTGTGATCCTTATTATGTTTGCTTCTTTGAAAACTGGTGCGTGTGCCCCGCACTTCTCAAATCTTTTGATTGCAAACCTCCCAACATCTCAACCTGTTCTAGGAGTTCAGCAGAACTTGTATTTGTTGGTGAAGATCTTGATTATTTTGCTCTCAAATACACTGCACCGGTTTCAAAATCATCCCTGAATGCATGCAAAGAGGCTTGCTTAGGGAACTGCTCTTGCCTTGTGCTTTTCTTTGAAAACAGTACCGGAAGATGCTTTCATTTTCATGAGACTGGGAGTTTCCAACGCTATAAGGGGGGCACCGGTGGTTATGTTTCATACATGAAGGTCTCCCTTAGTGGTGATGGACATGGCAACAAAAATGTAAGGAATGACACGATGCTAATTGTTGTCATAGTAGTTCTCACGGTTGTGGTTATAGTTGGTCTTATAACAGGATTCTGGTACTACTACAAGAGGAAGAAGAATGTTGCTGAGTACCCTCCTCAAAACACCTTGGAGGAAGATGATTTCTTGGACAGTCTCTCTGGGATGCCTGCTCGTTTTACTTTTAGTGCTCTTTGTAGAGCAACTAAGGACTTTTCCACAAAAATTGGGGAAGGAGGTTTTGGCTCAGTATATCTAGGTGTGGTTGAAGATGGCACCCAGCTGGCTGTGAAAAAATTGGAAGGTGTTGGACAAGGTGCTAAAGAGTTTAAAGCAGAAGTGTCCATAATTGGAAGTATTCATCATGTTCATTTGGTGAAGCTGAAAGGGTTCTGTGCTGAGGGTCCTCATCGCCTTCTTGTCTATGAATACATGGCAAGGGGTTCTTTGGACAAATGGATCTTCAAGAACAGTGAGAACAGTTTCTTGTTGAACTGGGACACAAGGTACAACATTGCATTAGGCACGGCAAAGGGATTGGCCTATCTCCATGAGGAGTGTGAAGTGAGGATCATCCACTGTGATATTAAGCCACAAAATGTTCTTCTTGATGATAACTTCGCCGCTAAGGTTTCAGATTTTGGATTGGCTAAGCTAATGAGCCGTGAGCAGAGCCATGTGTTCACAACTCTAAGGGGCACAAGAGGATATCTAGCACCGGAATGGATTACTAACTATGCAATTTCGGAGAAGAGTGATGTGTTCAGCTATGGCATGGTCTTGCTTGAGATAATTGGAGGGAGGAAGAACTATGATCAGTGGGAAGGGGCGGAGAAAGCACATTTTCCTTCTTATGTGTTCAGAATGATGGATGAGGGAAAACTGAAAGAGGTTCTTGATCCAAAGATAGATATTGATGAGAAGGATGAAAGAGTTGAGGTTGCTCTTAAAGTTGCTCTTTGGTGCATACAAGATGACGTGACTTTGAGGCCTTCCATGACTAAGGTAGCTCAGATGCTTGAAGGTTTGTGCCCTGTGCTTGATCCACCCTCATTATCTCAATCCGGTACTTTTTCAGCTTTCATGAAAATGAGTAGTGGAGAAGCTACTTCGTCGGGACAGGCTAGTTTTTTTAGTAATGTACCCATGTCGTGTGTTCAATTATCTGGACCAAGATGA 2421 0.4271 MGIFRCGTLLFYVLLLFRTCVANDQHIGQIYPGFSASHLDWNDHNGLFLLSNSSVFALGFFTALDVSLFVLVVIHLRSYKVVWTANRGLLVGNSDKFVFDRSGNAYLESGNGVVWATNTTGQKVRAMELLDSGNLVLRGENGTTIWQSFSHPTDTLLPGQAFVEGMTLRSFHNSMNLVHYLSYMAGDLVLYAGFETPQVYWSLSEAQRSSKNNTGKVHSASLVSNSWCFYDKNRGLLWKTFFSDHSDPKSLWAATLDPKGEISFYDLNKGKSPNPEAVKVPQDPCGIPEPCDPYYVCFFENWCVCPALLKSFDCKPPNISTCSRSSAELVFVGEDLDYFALKYTAPVSKSSLNACKEACLGNCSCLVLFFENSTGRCFHFHETGSFQRYKGGTGGYVSYMKVSLSGDGHGNKNVRNDTMLIVVIVVLTVVVIVGLITGFWYYYKRKKNVAEYPPQNTLEEDDFLDSLSGMPARFTFSALCRATKDFSTKIGEGGFGSVYLGVVEDGTQLAVKKLEGVGQGAKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLDKWIFKNSENSFLLNWDTRYNIALGTAKGLAYLHEECEVRIIHCDIKPQNVLLDDNFAAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVFSYGMVLLEIIGGRKNYDQWEGAEKAHFPSYVFRMMDEGKLKEVLDPKIDIDEKDERVEVALKVALWCIQDDVTLRPSMTKVAQMLEGLCPVLDPPSLSQSGTFSAFMKMSSGEATSSGQASFFSNVPMSCVQLSGPR 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0114 806 ProSiteProfiles Protein kinase domain profile. 484 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0114 806 ProSiteProfiles PAN/Apple domain profile. 322 403 IPR003609 -
Ssu8g0114 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 202 IPR036426 -
Ssu8g0114 806 ProSitePatterns Protein kinases ATP-binding region signature. 490 513 IPR017441 GO:0005524
Ssu8g0114 806 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 2 806 - -
Ssu8g0114 806 PIRSF SRK 3 803 IPR024171 GO:0004674
Ssu8g0114 806 SUPERFAMILY Protein kinase-like (PK-like) 467 755 IPR011009 -
Ssu8g0114 806 Pfam D-mannose binding lectin 81 162 IPR001480 -
Ssu8g0114 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Ssu8g0114 806 SMART serkin_6 484 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0114 806 Gene3D - 42 149 IPR036426 -
Ssu8g0114 806 Pfam Protein kinase domain 487 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0114 806 Gene3D Transferase(Phosphotransferase) domain 1 559 758 - -
Ssu8g0114 806 CDD PAN_AP_plant 320 403 - -
Ssu8g0114 806 ProSiteProfiles Bulb-type lectin domain profile. 34 150 IPR001480 -
Ssu8g0114 806 Gene3D Phosphorylase Kinase; domain 1 454 558 - -
Ssu8g0114 806 CDD B_lectin 45 152 IPR001480 -
Ssu8g0114 806 Gene3D - 150 245 IPR036426 -
Ssu8g0114 806 SMART blect_4 40 152 IPR001480 -
Ssu8g0114 806 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0114 Ssu-Chr8 1846374 1848794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0114 425 764 Receptor kinase-like Gene Family AT5G20050 44.568 1.16e-90 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ssu8g0114 Pkinase 2.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0114 - - gmx:100816004 1446.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0114 8 1846374 1848794 Ssu8g0114 8 1846374 1848794 ECH