Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu8g0114 | ATGGGCATATTCAGATGTGGAACCTTGCTTTTCTATGTGCTCCTTTTGTTTAGAACCTGCGTGGCCAATGATCAACACATTGGTCAGATATATCCTGGCTTCAGTGCTTCTCACCTGGATTGGAACGACCATAATGGTCTTTTCTTGCTATCCAACAGCTCAGTTTTCGCTTTGGGATTCTTTACTGCTCTTGATgtttcattgtttgttttagtAGTCATTCACTTAAGAAGCTACAAAGTGGTTTGGACTGCCAACAGAGGCTTACTCGTTGGGAATTCTGATAAATTTGTGTTTGACCGTAGTGGGAATGCATATTTGGAAAGTGGGAATGGTGTAGTTTGGGCAACGAACACAACAGGACAAAAAGTAAGAGCCATGGAATTGCTTGACTCAGGGAATTTGGTGTTGCGTGGGGAAAATGGGACAACTATTTGGCAAAGTTTTAGCCATCCCACTGATACCCTTTTGCCCGGACAAGCCTTTGTGGAAGGAATGACACTCAGAAGCTTTCACAACAGCATGAATTTGGTTCATTATCTTAGTTATATGGCAGGTGATTTGGTTCTCTATGCAGGATTTGAAACTCCACAAGTGTACTGGTCCCTATCAGAAGCCCAGAGAAGCTCAAAAAATAACACTGGTAAGGTTCACTCAGCGTCTTTGGTGTCCAATTCATGGTGTTTTTATGACAAAAATAGAGGTTTGCTATGGAAAACTTTCTTCTCTGACCACTCAGATCCCAAGTCATTGTGGGCTGCTACCTTGGACCCAAAAGGTGAAATCTCTTTTTATGATCTTAACAAAGGGAAGTCTCCTAACCCTGAGGCAGTCAAGGTACCACAAGACCCTTGTGGCATTCCTGAGCCTTGTGATCCTTATTATGTTTGCTTCTTTGAAAACTGGTGCGTGTGCCCCGCACTTCTCAAATCTTTTGATTGCAAACCTCCCAACATCTCAACCTGTTCTAGGAGTTCAGCAGAACTTGTATTTGTTGGTGAAGATCTTGATTATTTTGCTCTCAAATACACTGCACCGGTTTCAAAATCATCCCTGAATGCATGCAAAGAGGCTTGCTTAGGGAACTGCTCTTGCCTTGTGCTTTTCTTTGAAAACAGTACCGGAAGATGCTTTCATTTTCATGAGACTGGGAGTTTCCAACGCTATAAGGGGGGCACCGGTGGTTATGTTTCATACATGAAGGTCTCCCTTAGTGGTGATGGACATGGCAACAAAAATGTAAGGAATGACACGATGCTAATTGTTGTCATAGTAGTTCTCACGGTTGTGGTTATAGTTGGTCTTATAACAGGATTCTGGTACTACTACAAGAGGAAGAAGAATGTTGCTGAGTACCCTCCTCAAAACACCTTGGAGGAAGATGATTTCTTGGACAGTCTCTCTGGGATGCCTGCTCGTTTTACTTTTAGTGCTCTTTGTAGAGCAACTAAGGACTTTTCCACAAAAATTGGGGAAGGAGGTTTTGGCTCAGTATATCTAGGTGTGGTTGAAGATGGCACCCAGCTGGCTGTGAAAAAATTGGAAGGTGTTGGACAAGGTGCTAAAGAGTTTAAAGCAGAAGTGTCCATAATTGGAAGTATTCATCATGTTCATTTGGTGAAGCTGAAAGGGTTCTGTGCTGAGGGTCCTCATCGCCTTCTTGTCTATGAATACATGGCAAGGGGTTCTTTGGACAAATGGATCTTCAAGAACAGTGAGAACAGTTTCTTGTTGAACTGGGACACAAGGTACAACATTGCATTAGGCACGGCAAAGGGATTGGCCTATCTCCATGAGGAGTGTGAAGTGAGGATCATCCACTGTGATATTAAGCCACAAAATGTTCTTCTTGATGATAACTTCGCCGCTAAGGTTTCAGATTTTGGATTGGCTAAGCTAATGAGCCGTGAGCAGAGCCATGTGTTCACAACTCTAAGGGGCACAAGAGGATATCTAGCACCGGAATGGATTACTAACTATGCAATTTCGGAGAAGAGTGATGTGTTCAGCTATGGCATGGTCTTGCTTGAGATAATTGGAGGGAGGAAGAACTATGATCAGTGGGAAGGGGCGGAGAAAGCACATTTTCCTTCTTATGTGTTCAGAATGATGGATGAGGGAAAACTGAAAGAGGTTCTTGATCCAAAGATAGATATTGATGAGAAGGATGAAAGAGTTGAGGTTGCTCTTAAAGTTGCTCTTTGGTGCATACAAGATGACGTGACTTTGAGGCCTTCCATGACTAAGGTAGCTCAGATGCTTGAAGGTTTGTGCCCTGTGCTTGATCCACCCTCATTATCTCAATCCGGTACTTTTTCAGCTTTCATGAAAATGAGTAGTGGAGAAGCTACTTCGTCGGGACAGGCTAGTTTTTTTAGTAATGTACCCATGTCGTGTGTTCAATTATCTGGACCAAGATGA | 2421 | 0.4271 | MGIFRCGTLLFYVLLLFRTCVANDQHIGQIYPGFSASHLDWNDHNGLFLLSNSSVFALGFFTALDVSLFVLVVIHLRSYKVVWTANRGLLVGNSDKFVFDRSGNAYLESGNGVVWATNTTGQKVRAMELLDSGNLVLRGENGTTIWQSFSHPTDTLLPGQAFVEGMTLRSFHNSMNLVHYLSYMAGDLVLYAGFETPQVYWSLSEAQRSSKNNTGKVHSASLVSNSWCFYDKNRGLLWKTFFSDHSDPKSLWAATLDPKGEISFYDLNKGKSPNPEAVKVPQDPCGIPEPCDPYYVCFFENWCVCPALLKSFDCKPPNISTCSRSSAELVFVGEDLDYFALKYTAPVSKSSLNACKEACLGNCSCLVLFFENSTGRCFHFHETGSFQRYKGGTGGYVSYMKVSLSGDGHGNKNVRNDTMLIVVIVVLTVVVIVGLITGFWYYYKRKKNVAEYPPQNTLEEDDFLDSLSGMPARFTFSALCRATKDFSTKIGEGGFGSVYLGVVEDGTQLAVKKLEGVGQGAKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLDKWIFKNSENSFLLNWDTRYNIALGTAKGLAYLHEECEVRIIHCDIKPQNVLLDDNFAAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVFSYGMVLLEIIGGRKNYDQWEGAEKAHFPSYVFRMMDEGKLKEVLDPKIDIDEKDERVEVALKVALWCIQDDVTLRPSMTKVAQMLEGLCPVLDPPSLSQSGTFSAFMKMSSGEATSSGQASFFSNVPMSCVQLSGPR | 806 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu8g0114 | 806 | ProSiteProfiles | Protein kinase domain profile. | 484 | 761 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g0114 | 806 | ProSiteProfiles | PAN/Apple domain profile. | 322 | 403 | IPR003609 | - | |
Ssu8g0114 | 806 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 78 | 202 | IPR036426 | - | |
Ssu8g0114 | 806 | ProSitePatterns | Protein kinases ATP-binding region signature. | 490 | 513 | IPR017441 | GO:0005524 | |
Ssu8g0114 | 806 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 | 2 | 806 | - | - | |
Ssu8g0114 | 806 | PIRSF | SRK | 3 | 803 | IPR024171 | GO:0004674 | |
Ssu8g0114 | 806 | SUPERFAMILY | Protein kinase-like (PK-like) | 467 | 755 | IPR011009 | - | |
Ssu8g0114 | 806 | Pfam | D-mannose binding lectin | 81 | 162 | IPR001480 | - | |
Ssu8g0114 | 806 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 605 | 617 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu8g0114 | 806 | SMART | serkin_6 | 484 | 754 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g0114 | 806 | Gene3D | - | 42 | 149 | IPR036426 | - | |
Ssu8g0114 | 806 | Pfam | Protein kinase domain | 487 | 752 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g0114 | 806 | Gene3D | Transferase(Phosphotransferase) domain 1 | 559 | 758 | - | - | |
Ssu8g0114 | 806 | CDD | PAN_AP_plant | 320 | 403 | - | - | |
Ssu8g0114 | 806 | ProSiteProfiles | Bulb-type lectin domain profile. | 34 | 150 | IPR001480 | - | |
Ssu8g0114 | 806 | Gene3D | Phosphorylase Kinase; domain 1 | 454 | 558 | - | - | |
Ssu8g0114 | 806 | CDD | B_lectin | 45 | 152 | IPR001480 | - | |
Ssu8g0114 | 806 | Gene3D | - | 150 | 245 | IPR036426 | - | |
Ssu8g0114 | 806 | SMART | blect_4 | 40 | 152 | IPR001480 | - | |
Ssu8g0114 | 806 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 2 | 806 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu8g0114 | Ssu-Chr8 | 1846374 | 1848794 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu8g0114 | 425 | 764 | Receptor kinase-like Gene Family | AT5G20050 | 44.568 | 1.16e-90 | 291 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Ssu8g0114 | Pkinase | 2.6e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu8g0114 | - | - | gmx:100816004 | 1446.8 |