Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0098 ATGAGCCGTTGGATCATCGCGAATCTCCACGTATCCAATCCAACGGTAGCGAATCCAGTCAAGGAGGCCGGCGGCGCTAGGTTTCCGGCGAGGATGGGTGCGACGTTGTTGTCGGAGCTCGCGACGGAGATAGTGGTGCCGGTGTGCGCGGTGGTGGGGATTGTGTTCTCGTTGGTGCAGTGGCACCTGGTGTCGAGCGTGAAGCTCACGCCCGAGCGCCACGGGTCCTCGTCTTCCCCGCGCAACGACAACGGAAACAACAAGAACGGTTACGGAGACTACCTGATTGAGGAAGAAGAAGGCATCAATGACCATAACATCGTCGTAAAATGCGCTGACATACAGAGCGCCATCTCCGAAGGTGAGCTTTCTGCTCTAGATCTCAAGATCTCGCTGAGATCTGCTTCTGCTTTCTCTCTTTCGTAA 426 0.5587 MSRWIIANLHVSNPTVANPVKEAGGARFPARMGATLLSELATEIVVPVCAVVGIVFSLVQWHLVSSVKLTPERHGSSSSPRNDNGNNKNGYGDYLIEEEEGINDHNIVVKCADIQSAISEGELSALDLKISLRSASAFSLS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0098 141 MobiDBLite consensus disorder prediction 71 89 - -
Ssu8g0098 141 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 32 126 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu8g0098 141 MobiDBLite consensus disorder prediction 71 91 - -
Ssu8g0098 141 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 32 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0098 Ssu-Chr8 1622839 1623408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0098 36 126 Primary Pumps ATPases AT1G15690 64.835 4.00e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0098 K23025 - gmx:100794166 139.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0098 8 1622839 1623408 Ssu8g0098 8 1622839 1623408 ECH