Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0097 ATGGGGTCTGTGGAGAGCTTTAGCACCAAGAACCAGCCCTGCACGTATGACAAGGGGAAGCTATGTAAACCAGCCCTTGCAACTGCGCTCTTTAGCACTGTGTCTTTCTTGCTTGGTGCTTTAACTTCAGTTCTATCTGGTTACCTTGGGATGAAAATTGCTACCTATGCCAATGTAAGGACAACCTTGGAGGCAAGAAAGGGAGTTGGAAAGGCATTTATTACTGCGTTTAGATCTGGTGCAGTAATGGGTTTCCTTCTTGCAGCAAATGGTCTTTTGGTGCTGTACATTGCCATCAATCTCTTCAAGCTATATTATGGTGATGATTGGGAAGGCCTTTTTGAGTCTATAACTGGTTATGGTTTGGGTGGATCTTCCATGGCTCTGTTTGGGAGAGTTGGTGGCGGTATCTATACCAAGGCTGCTGATGTTGGTGCTGATCTGGTTggaaaagttgaaagaaatatCCCAGAGGATGATCCAAGAAACCCAGCTGTAATTGCTGACAATGTTGGTGATAATGTTGGCGATATTGCTGGGATGGGTTCTGATCTTTTTGGTTCATATGCTGAATCATCCTGCGCTGCTCTAGTTGTTGCTTCGATTTCCTCATTTGGAATCAACCATGATTTCACTGCTATGTTGTATCCCTTACTTATCAGTTCTATGGGCATTCTTGTCTGTTTGATCACTACTCTATTTGCAACTGATTTCTTTGAGATCAAGGCAGTCAAGGAAATTGAACCAGCATTGAAAAAACAGCTTATCATCTCAACTGTTCTCATGACTTTTGGAATTGCAATTATTAGTTGGCTTGCTCTTCCGTCATCCTTCACAATTTTCAACTTTGGAGCTCAGAAAGAAGTGAAGAGCTGGCAGCTGTTCTTATGTGTGGGTGTTGGTCTTTGGGCTGGACTTATTATTGGGTTTGTGACTGAATATTATACAAGCAATGCATACAGCCCTGTACAAGATGTTGCTGATTCTTGCCGTACTGGAGCTGCAACCAATGTCATCTTTGGCCTTGCTCTGGGATACAAGTCTGTCATTATTCCTATTTTTGCCATTGCAGCCAGTATTTTTGTGAGTTTTAGTTTTGCCGCAATGTATGGTATTGCTGTCGCTGCCCTTGGGATGCTGAGCACCATTGCTACTGGGTTGGCTATTGATGCCTATGGGCCCATTAGTGACAATGCAGGAGGTATTGCTGAGATGGCAGGCATGAGCCATCGGATCCGTGAGAGAACTGATGCCCTTGATGCTGCAGGCAACACTACTGCTGCCATTGGCAAGGGATTTGCTATCGGGTCTGCTGCACTAGTGTCTTTGGCCTTATTTGGTGCCTTTGTCAGCCGGGCAGGAATTTCAACCGTAGATGTTTTGACTCCCAAGGTCTTCATTGGACTCATAGTTGGTGCCATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTAGGAAGTGCAGCTTTGAAGATGGTTGAGGAGGTTCGTAGGCAGTTCAACACCATTCCCGGACTTATGGAGGGTCATGCCAAGCCTGATTATGCTACTTGTGTCAAGATTTCTACTGATGCATCAATTAAGGAGATGATTCCTCCAGGAGCCCTTGTCATGCTTACACCACTTATCGTTGGTATCTTTTTTGGAGTAGAAACTCTTTCAGGTGTTCTTGCCGGCTCTCTGGTTTCTGGTGTGCAGATCGCAATATCAGCATCCAACACCGGTGGTGCTTGGGACAATGCTAAGAAGTACATTGAGGCCGGCGCTTCTGAGCATGCCCGGACATTGGGCCCAAAGGGATCTGAACCACACAAAGCAGCTGTTATTGGTGACACCATTGGAGACCCTCTTAAGGATACTTCCGGCCCTTCGCTTAACATCCTTATCAAGCTCATGGCGGTTGAGTCACTTGTTTTTGCTCCATTTTTCGCCACCCATGGCGGCTTGCTATTTAAGATCTTTTGA 1971 0.4521 MGSVESFSTKNQPCTYDKGKLCKPALATALFSTVSFLLGALTSVLSGYLGMKIATYANVRTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKLYYGDDWEGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHDFTAMLYPLLISSMGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTFGIAIISWLALPSSFTIFNFGAQKEVKSWQLFLCVGVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAASIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGHAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0097 656 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 1 656 - -
Ssu8g0097 656 Pfam Inorganic H+ pyrophosphatase 29 641 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu8g0097 656 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 656 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu8g0097 656 PIRSF H+-PPtase 14 654 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu8g0097 656 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 1 646 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu8g0097 656 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 3 651 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0097 Ssu-Chr8 1618649 1621529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0097 1 519 Primary Pumps ATPases AT1G15690 91.908 0.0 965
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0097 K23025 - gmx:100803691 1232.62