Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0087 ATGCCGAATCTGGTTGTCAAAGCTGGGAGCAGACCTCCATGGGTGGGTCTTGCAGCTGCACTTTGGGTTCAAATAGCAGCTGGCAATGCATACAACTTCCCCCTCTATTCCTCTGCCCTCAAATCCGTGATGGGTCTCAACCAGAAACAGGTCACTATTCTGGGAGTGGCCAATGATGTTGGGGAGAACCTGGCTCTGCTTCCTGGCATTGCATGCAACAAGTTCCCTCCCTGGGCTTTGCTTCTACTTGGTTCTCTCCTTTGTTTCGTTGGTTATGGCCTTATCTGGCTTGTTGTTAACCAAACTGTTTCCCAATTACCCTATCTCCTGTTATGGCTAGCCCTTTGTGTTGCCACTAACAGCTGCGCATGGTTTGGCACGGCTGTCCTTGTCACCAACATGAGAAACTTTCCTCTTAGTAGAGGCACCATCTCGGCATTCTTAAAGGTTATGTGGGGATTAGCGCTGCAGTATACACGTTAA 483 0.4928 MPNLVVKAGSRPPWVGLAAALWVQIAAGNAYNFPLYSSALKSVMGLNQKQVTILGVANDVGENLALLPGIACNKFPPWALLLLGSLLCFVGYGLIWLVVNQTVSQLPYLLLWLALCVATNSCAWFGTAVLVTNMRNFPLSRGTISAFLKVMWGLALQYTR 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0087 160 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 155 - -
Ssu8g0087 160 Pfam Nodulin-like 13 155 IPR010658 -
Ssu8g0087 160 SUPERFAMILY MFS general substrate transporter 11 154 IPR036259 -
Ssu8g0087 160 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0087 Ssu-Chr8 1467787 1468737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0087 1 155 Nodulin-like Gene Family AT1G80530 62.581 1.51e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0087 - - jre:108987545 249.595