Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0078 ATGATGCGGCGAAAGGGTGTGGGAATGCCGGGAGTGAAGAGTTGGATGGTGGTGTCGGAGAGAGGGCAGGCACACCTGGAGGATGTTGGGAAGCACTCCATAATGCGACGAACTGGGTTGCCGGCGCGTGACCTTAGGGTCCTCGATCCCATTCTGTCTCACCCTTCTTCCATCCTCGGACGCGAAAGAGCCATTGTTGTCAACTTGGAACACGTCAAAGCCATCATCACTGCCACGGAGGTCCTCATGATCAACTCCTCCAACCCTTTCTTTCTTTGCTTCCTTCAAGATCTCCACACCCGTCTTTCTAAACAAACTCCCTCCGCGATGAGCAATGACATGGATGGTGGTTACGAAGCAAAACCTCTAGCGATGGGATCTGATGCCTTTCATGTAAGAGTGGATAGCTCTAAGATCAGTGCAGAGATTGTAACAGGAGCACCAGCTCCTAAGCAGTTACCTTTTGAGTTCAGAGCACTTGAGTCATGTATTGAATCTGCTTGCAGGTGCCTTGAATCTGAGACTTCAACTTTGGAAATAGAAGCTTACCCGGCTTTAGATGAATTGACCTCTCAACTTAGCACACTCAATCTTGAACGTGTAAGACAGATCAAGAGCCGTTTGGTTGCAGTTTCCGGTCGTGTGCAGAAGGTAGCAGATGAACTGGAACATTTGTTGGACGATGATAATGACATGGCTGAAATGTACTTGACACAAAAGCTTAGTGCTCGTTTATGGGATCAGGCATCATTCAAAGACGGGTACAATTCCGAATTTCAAGAGAACGATCAAAGTGATGAATCAAATTCAGAAAAGTTTGACAAATTCCCTGGTCCTAAACTTGACGCTGAGGAATTGGAGATGCTTCTAGAAGCATATTTTGCGCAGACAAATGGAATCTTGCAAAGATTGTCTAGCTTGAGTGAGTACGTGGATGACACGGAGGACTACATCAACATAATGTTGGATGATAAGCAAAATGAGCTTCTGCAGGATTGTTTGGCATGA 1008 0.4633 MMRRKGVGMPGVKSWMVVSERGQAHLEDVGKHSIMRRTGLPARDLRVLDPILSHPSSILGRERAIVVNLEHVKAIITATEVLMINSSNPFFLCFLQDLHTRLSKQTPSAMSNDMDGGYEAKPLAMGSDAFHVRVDSSKISAEIVTGAPAPKQLPFEFRALESCIESACRCLESETSTLEIEAYPALDELTSQLSTLNLERVRQIKSRLVAVSGRVQKVADELEHLLDDDNDMAEMYLTQKLSARLWDQASFKDGYNSEFQENDQSDESNSEKFDKFPGPKLDAEELEMLLEAYFAQTNGILQRLSSLSEYVDDTEDYINIMLDDKQNELLQDCLA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0078 335 PANTHER MAGNESIUM TRANSPORTER MRS2-F 3 332 - -
Ssu8g0078 335 MobiDBLite consensus disorder prediction 256 277 - -
Ssu8g0078 335 Gene3D Magnesium transport protein CorA, transmembrane region 92 329 - -
Ssu8g0078 335 Gene3D - 10 87 - -
Ssu8g0078 335 CDD Mrs2_Mfm1p-like 15 331 IPR039204 -
Ssu8g0078 335 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 332 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0078 Ssu-Chr8 1332175 1336679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0078 14 331 MRS2 Gene Family AT3G19640 47.792 6.76e-106 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0078 - K16075 gmx:100808805 518.079