Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu8g0050 | ATGCCTTCAAGACCCTTCCCTCCCACAAATCCCACCAAAACCAAGGCACTCTTCCTAGCACTCACCATTTCAGCTTGTGTTGTGATTTTTTGCTCAATTCTTTACTTCCTCTACCATCTCTGGCATTCCCTTGTTCACAGAGCTAAGACCATCCCCTTTGATGCAAGTGCTCCATTGAAGCTCCAAAGGTTCTCATACAAAGATTTAAAGCAAGCCACCAATGGCTTTGACACTGCCAATGTCATTGGCAAAGGTGGCTCTGGCACTGTTTTCAGGGGAATACTAAAAGATGGCAAGTTGATTGCCATCAAGCGCCTGGACGCGTTGTCTTTGCAGTCAGAGAGAGAGTTTCAAAACGAGCTGCAGATTCTTGGAGGGTTAAGGTCACCATTTTTGGTGACCCTTTTGGGTTACTGTGTGGAAAAGAACAAGAGAGTGTTGGTGTATGAGTACATACCCAACAGAAGCTTGCAGGAGTCACTCTTTGGAGATGGGGGTTTGAGCTTGAGTTGGGAGAGCAGGTTTTGCATAATATTGGATGTTGCTAGAGCTTTGGAGTTCTTGCACCTTGGATGTGATCCTCCAGTGATCCATGGTGATATCAAGCCAAGCAATGTTCTGCTTGATGCTGAGTGGCGTGGGAAGATCTCTGACTTTGGATTGTCAAGGATTAAGGTGGAGGGTGAGTTTGGTGTGGACTTGTTTAGCCAGGAACTGGGGAGGAGCCAGGATCTATGGAAAAGCCAAGACCTTTCAGGTAATTTGACTGCAGAAACTCCTGCTATTGGTACTCCTGTTGAGAGTGTTAGTGAAGTAGACTTTGCTCTAGCTTTGCAAGCCTCGTCTTCATCCAAAAATAGTAGGACCTGCTTTAATGTTAAAGCTTTGAACTTGAATTCTTTGAATTATAATGCCAATATTGCCAGTGAAAGTGAAATTAGGTGTGTAAATGCAAAGGGTAAGGAAATTTCAGCTTTGGATAGGGATGATTGGAATGGtaagtttttttcttatgatGATGAGCTTTCTAGCATTGATTATAGTAAGGAGTTAACTGTTAATGCTTCTTCTTTGGTGGATGATGAGAAGGCAAATGGGAAACAATGGGGAAAGGACTGGTGGTGGAGACAGGATGGAAATGGAGAATTATGTAGTAAAGACTATGTTATGGAGTGGATAGGGAGTCAGATTTGTCCATCAAACCCTGATTGGGATGATGGTAAGAACAATGTTCACGAGAAAGTAGAGTTGGAAAATTCAAGTCCCAAGGATAAAGACCATGATGCAATTGCACCCCAACCACAGGTGTTTGGGATAGGACATACTACAGATAATGGGGTTGAGAAAAAAGAATCAAGGGGaaagaaaaatcacaaaaagAAGCACAGGAAGATGCAAGAGTGGTGGAGAGAAGAGCATCTTGCTGAATTAAGCAAGAAGACCAGTAAACTGAAAAATCTTCATACTAAGTGGAGGAAAGGCTTGAAGGTGCCCCATTTTGACTTGGGTAGAAGGTTTTATCTTTGCAGACGTAAGAAGTTTGGAGAGGAGGGTGAGAATGAGTGTGATCAAAATGGGGAGTTTAGCTTCAGAAGAGGTTGGAAGAAGAAAAGTACTCGTTCCATTGGAAGTGACATGTGGAGTGGAGATCTTTTCAGCCGCGAGCTCAGCAGCACAACTAGCATGAGAGGGACACTTTGTTATGTGGCACCTGAATATGGAGGGTGTGGGTTCTTAATGGAGAAAGCTGACATTTATAGTTTTGGagttttgattcttgtaattgTGTCAGGTAGAAGACCATTGCATGTTCTTGCATCACCCATGAAGCTAGAGAAAGCTAACTTAATAAGCTGGTGTAGACACTTGGCTCAAGCTGGTAACATTTTAGAACTAGTGGATGAGAGATTGAAAGAAGATTACAACAAGGACCAAGCAAGCCTGTGTATCAACTTGGCACTCACCTGCTTACAGAAAATTCCAGAGTTGCGGCCAGATATTGGGGATATTGTCAAGATTTTTAAGGGGGAGATGGACCTTCCACCACTTCCATTTGAGTTCTCCCCTTCTCCACCTTCCAAATTATACAGCAAATCAAGAAGAAAACAGAAGGGCACTGCAGAACAGATTTTGTAA | 2136 | 0.4232 | MPSRPFPPTNPTKTKALFLALTISACVVIFCSILYFLYHLWHSLVHRAKTIPFDASAPLKLQRFSYKDLKQATNGFDTANVIGKGGSGTVFRGILKDGKLIAIKRLDALSLQSEREFQNELQILGGLRSPFLVTLLGYCVEKNKRVLVYEYIPNRSLQESLFGDGGLSLSWESRFCIILDVARALEFLHLGCDPPVIHGDIKPSNVLLDAEWRGKISDFGLSRIKVEGEFGVDLFSQELGRSQDLWKSQDLSGNLTAETPAIGTPVESVSEVDFALALQASSSSKNSRTCFNVKALNLNSLNYNANIASESEIRCVNAKGKEISALDRDDWNGKFFSYDDELSSIDYSKELTVNASSLVDDEKANGKQWGKDWWWRQDGNGELCSKDYVMEWIGSQICPSNPDWDDGKNNVHEKVELENSSPKDKDHDAIAPQPQVFGIGHTTDNGVEKKESRGKKNHKKKHRKMQEWWREEHLAELSKKTSKLKNLHTKWRKGLKVPHFDLGRRFYLCRRKKFGEEGENECDQNGEFSFRRGWKKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQAGNILELVDERLKEDYNKDQASLCINLALTCLQKIPELRPDIGDIVKIFKGEMDLPPLPFEFSPSPPSKLYSKSRRKQKGTAEQIL | 711 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu8g0050 | 711 | SUPERFAMILY | Protein kinase-like (PK-like) | 56 | 694 | IPR011009 | - | |
Ssu8g0050 | 711 | SMART | serkin_6 | 76 | 675 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g0050 | 711 | ProSitePatterns | Protein kinases ATP-binding region signature. | 82 | 104 | IPR017441 | GO:0005524 | |
Ssu8g0050 | 711 | MobiDBLite | consensus disorder prediction | 686 | 711 | - | - | |
Ssu8g0050 | 711 | Pfam | Protein kinase domain | 78 | 226 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g0050 | 711 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 196 | 208 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu8g0050 | 711 | ProSiteProfiles | Protein kinase domain profile. | 76 | 683 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g0050 | 711 | PANTHER | OS07G0586332 PROTEIN | 1 | 707 | IPR044576 | - | |
Ssu8g0050 | 711 | PANTHER | OS08G0275200 PROTEIN | 1 | 707 | - | - | |
Ssu8g0050 | 711 | MobiDBLite | consensus disorder prediction | 418 | 465 | - | - | |
Ssu8g0050 | 711 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 26 | - | - | |
Ssu8g0050 | 711 | Gene3D | Phosphorylase Kinase; domain 1 | 43 | 151 | - | - | |
Ssu8g0050 | 711 | Gene3D | Transferase(Phosphotransferase) domain 1 | 152 | 262 | - | - | |
Ssu8g0050 | 711 | Gene3D | Transferase(Phosphotransferase) domain 1 | 533 | 679 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu8g0050 | Ssu-Chr8 | 840399 | 842534 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu8g0050 | 542 | 672 | Receptor kinase-like Gene Family | AT3G58690 | 31.061 | 3.05e-13 | 70.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XI | Ssu8g0050 | Pkinase | 8.3e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu8g0050 | - | - | ccaj:109812677 | 1352.04 |