Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0040 ATGTGTGCTGCTAGTGCTAGTGCAATGGACTCCGTCACGCTTTCAGTTGCTGTGGGTGTTTTTTCTCTCGTCGTGTTGTTCCTGGTACTCCGGCTCAGACCAGGATTCGCCACCTTTTTCACTCACAAACGTGCGGGAGTTCCCCCAGTACCAGCGGTTCCAGGTTTACCAGTGATAGGGAATCTGCTGCAATTGAAGGAGAAGAAACCTTACAAGACCTTCACACAGATGGCTCAGAAACATGGTCCCATTTATTCCATCAGAACGGGTGCTTCCACCCTCATTGTTCTCAACTCTGCCCATCTTGCTAAGGAGGCAATGGTGACCAGATTTTCGTCAATTTCAACAAGGAAGTTATCAAATGCACTGAAGATCCTGACTTCTGATAAATGTATGGTTGCCACAAGTGACTACAATGAATTTCACAAAATGGTCAAAAGACATATTCTTACAAACTTTCTGGGAGCCAATGCACAGAAGCGACACCATATCCACAGAGAAGGCATGatggaaaatattttgaggcTGTTCAATGAACATGTGAAGACCTTCTCTGATTTGGCagttaattttaggaaaatatttgCATCTGAACTTTTTGGATTAGCACTGAAGCAAGCTCTGGGAAGTAATGTAGAGTCCATTGATGTGGAGGAGCTTGGGGGTACATTATCAAGAGAGGACATATATAAGATTCTAGTGGTTGATATAATGGAGGGTGCAATTGAGGTGGATTGGCGAGATTTCTTTCCATACTTGAAGTGGATTCCAAATAGGAGCATGGAGATGAAAATTCAGAATTTGTATGTCCGCAGAAAAGCTGTCATGAAGGCCTTGATGAATGAGCAGAAAAAGAGAATGGCTTCAGGAAAGGaagtaaattgttattttgactACCTGGTATCCGAAGCTAAACAACTAACTGAAGATCAAATTTCCATGCTAATCTGGGAGACCATTATTGAGACATCTGATACTACATTAGTTACAACAGAATGGGCTATGTATGAACTTGCTAAAGACAAAACTCGTCAGGACCGTCTTTACAAGGAGCTCCAATATGTATGTGGACATGAAAAAGTTACAGAAGACCAATTAGCTAAGCTACCTTACTTGGGGGCTGTATTCCATGAAACTTTAAGGAAGCATAGTCCAGCTCCGATTGTGCCACTAAGATATGTACATGAAGATACAGAATTGGGAGGATATCATATTCCTGCCGGAAGCGAGATcgcaataaatatatatggatGCAACATGGACGAGAATCGGTGGGAAAATCCTTATGAGTGGATGCCTGAGAGATTTCTTGATGAGAAATATGACCCCATGGATTTATACAAGACCATGGCCTTTGGAGCAGGGAAGAGGATGTGTGCAGGCTCTCTTCAGGCCATGTTGATAGCTTGCACCGCAATTGGCAGATTGGTTCAGCAATTTGAGTGGGAGCTGGGACAAGGAGAGGAAGAGAATGTGGATACAGTGGGCCTTACCACCCACAAGCTCCATCCTCTGCTAGTAAAACTCAGGCTAAGAAATCAATAG 1545 0.4168 MCAASASAMDSVTLSVAVGVFSLVVLFLVLRLRPGFATFFTHKRAGVPPVPAVPGLPVIGNLLQLKEKKPYKTFTQMAQKHGPIYSIRTGASTLIVLNSAHLAKEAMVTRFSSISTRKLSNALKILTSDKCMVATSDYNEFHKMVKRHILTNFLGANAQKRHHIHREGMMENILRLFNEHVKTFSDLAVNFRKIFASELFGLALKQALGSNVESIDVEELGGTLSREDIYKILVVDIMEGAIEVDWRDFFPYLKWIPNRSMEMKIQNLYVRRKAVMKALMNEQKKRMASGKEVNCYFDYLVSEAKQLTEDQISMLIWETIIETSDTTLVTTEWAMYELAKDKTRQDRLYKELQYVCGHEKVTEDQLAKLPYLGAVFHETLRKHSPAPIVPLRYVHEDTELGGYHIPAGSEIAINIYGCNMDENRWENPYEWMPERFLDEKYDPMDLYKTMAFGAGKRMCAGSLQAMLIACTAIGRLVQQFEWELGQGEEENVDTVGLTTHKLHPLLVKLRLRNQ 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0040 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Ssu8g0040 514 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 11 513 - -
Ssu8g0040 514 Pfam Cytochrome P450 52 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0040 514 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0040 514 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0040 514 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0040 514 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0040 514 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0040 514 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0040 514 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0040 514 SUPERFAMILY Cytochrome P450 48 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0040 514 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 11 513 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Ssu8g0040 514 Gene3D Cytochrome P450 41 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0040 514 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0040 514 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0040 514 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0040 Ssu-Chr8 724728 727691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0040 47 512 Cytochrome P450 AT5G25900 65.525 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0040 K04122 - gmx:100802970 870.537