Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu8g0039 | ATGGCTAAGACGTCACAGAAAAGCCTCAAGAACACTACTGCTGCTACTACCAACACCCCCACCAAGGTCAAGCGGTCACGCAAGACCATCCCAAGAGACACCCCTTCACAACGAAGCTCAATCTACCGGGGCGTTACAagGCATCGATGGACAGGTCGATATGAGGCTCATTTGTGGGATAAGACTTGCTGGAATGAATCGCAGAACAGGAAAGGAAGACAAGTATATCTCGGGGCATATGACGAAGAAGATGCGGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAACACACCATCCTCAATTTTCCGCTATCAAATTATCAAGACGAGCTTAAGGAGATGGAGGATCAATCTAAGGAAGAATATATTGGATCTTTAAGAAGAAAAAGTAGCGGCTTCTCTCGAGGAGTCTCAAAATATAGAGGCGTCGCAAGACACCATCACAATGGAAGATGGGAAGCTCGGATTGGCAGAGTCTTCGGCAACAAATATCTATACCTTGGAACTTATGCTACAGAAGAAGAAGCAGCGATGGCGTACGATATGGCGGCCATAGAGTACCGTGGACTTAATGCGGTTACAAACTTTGACCTTAGTCGTTATATCAAATGGCCACGTCCAAAATGCCAAGAAACACGTGGCAACCCTGAACATGAGGTTAAAGCCCACCATCTAAGCCCAACGACAAGCGAGATCACAACACTACCATCTGGCAATGCCACCGCAACAACTTCTTCATTGGGGCCTCTTTTTCAGTCATTGAGATTCAAAGAAGTGATAGAAAGGACTTCAGTTTCGGATTGCCCTCCACCACCTTCTTCACCCTCAAACCCTCCTCCTCGTACATTCCCTCAAGatattcaaacattttttgaaaGTCAAGATTCTGGAATCTACGCAGACAGTGATGACATTATATTTGGCGACTTGACCTCCATTGCTTCACCAATTTTTCATTGTGAGCTCAATgcttag | 987 | 0.4529 | MAKTSQKSLKNTTAATTNTPTKVKRSRKTIPRDTPSQRSSIYRGVTRHRWTGRYEAHLWDKTCWNESQNRKGRQVYLGAYDEEDAAARAYDLAALKYWGQHTILNFPLSNYQDELKEMEDQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATEEEAAMAYDMAAIEYRGLNAVTNFDLSRYIKWPRPKCQETRGNPEHEVKAHHLSPTTSEITTLPSGNATATTSSLGPLFQSLRFKEVIERTSVSDCPPPPSSPSNPPPRTFPQDIQTFFESQDSGIYADSDDIIFGDLTSIASPIFHCELNA | 328 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu8g0039 | 328 | SUPERFAMILY | DNA-binding domain | 40 | 109 | IPR016177 | GO:0003677 | |
Ssu8g0039 | 328 | SUPERFAMILY | DNA-binding domain | 142 | 203 | IPR016177 | GO:0003677 | |
Ssu8g0039 | 328 | SMART | rav1_2 | 41 | 113 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu8g0039 | 328 | SMART | rav1_2 | 143 | 207 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu8g0039 | 328 | Gene3D | AP2/ERF domain | 142 | 203 | IPR036955 | GO:0003700|GO:0006355 | |
Ssu8g0039 | 328 | Gene3D | AP2/ERF domain | 41 | 109 | IPR036955 | GO:0003700|GO:0006355 | |
Ssu8g0039 | 328 | Pfam | AP2 domain | 41 | 99 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu8g0039 | 328 | Pfam | AP2 domain | 142 | 193 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu8g0039 | 328 | ProSiteProfiles | AP2/ERF domain profile. | 143 | 201 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu8g0039 | 328 | CDD | AP2 | 142 | 203 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu8g0039 | 328 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Ssu8g0039 | 328 | ProSiteProfiles | AP2/ERF domain profile. | 41 | 107 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu8g0039 | 328 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 311 | - | - | |
Ssu8g0039 | 328 | MobiDBLite | consensus disorder prediction | 266 | 289 | - | - | |
Ssu8g0039 | 328 | PRINTS | Ethylene responsive element binding protein signature | 183 | 203 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu8g0039 | 328 | PRINTS | Ethylene responsive element binding protein signature | 42 | 53 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu8g0039 | 328 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 311 | - | - | |
Ssu8g0039 | 328 | MobiDBLite | consensus disorder prediction | 214 | 234 | - | - | |
Ssu8g0039 | 328 | MobiDBLite | consensus disorder prediction | 272 | 286 | - | - | |
Ssu8g0039 | 328 | MobiDBLite | consensus disorder prediction | 214 | 229 | - | - | |
Ssu8g0039 | 328 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu8g0039 | Ssu-Chr8 | 706565 | 713297 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu8g0039 | 20 | 205 | AP2-EREBP Transcription Factor Family | AT5G57390 | 69.149 | 2.49e-92 | 280 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Ssu8g0039 | AP2 | 4.9e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu8g0039 | K09285 | - | pop:112326885 | 445.277 |