Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3299 ATGGACGCATCTCTGAAGTTCACAGTGCGGAGGCGTGAGCCAGAGCTGATAGCTCCGGCGAGGCCCACGCCACGCGAAGTGAAGCTGCTCTCGGACATAGACGACCAAGATGGCCTACGCTTCCAAATTCCAGTGATTCAGTTCTACCGCAATGACCCATCACAGGGAGGGAAAGACGCTGTTGAGGTGATCAGAGAGGCTGTGGCGAAAACGCTCGTGTTTTACTACCCTTTTGCAGGCAGGCTCAGGGAAGGGCGTGGTCGGAAACTGATGGTGGACTGTACTGGGGAAGGTGTTTTGTTCATTGAAGCCGATGCAGATGTGACGCTTAAGCAATTTGGCGATGCTCTTCAACCTCCCTTCCCGTGCTGGGAGGAACTACTTTATGATGTTCCCGGATCCGAAGGAGTCCTTAACACTCCCCTCCTGCTTATACAGTGGTTGTTGACATATCTGGCGGTGGCACCTGTAAGGACTCCGATGTCTGAGTCAGTAGGAATTCAAGTGCGCTTCTCATGCTGTGCCAGGATAAGTGTGGGGTTGGTCCGAAATAGTAAGGATTTACAAGCCGGGGTACTAGCGGGCATGTCAACCGGGATAGATGATTGCAGTTTGCACACAGTTACTGCTCAAGAATCATTTAGTCAGGGAATGACTCAGTTGACTTCATTCTCTCAAGTTTCATTTGACGACAAATTTTTGGGGAATGTTTTGGTTAAGAGCAAAGCTGAAATCAATCAATTGTGTGAGGATGGGGAATTGAGTCCATATGCTGTTCCCAAAGCTATTGACAGTCTTCTTGGAAAGACTTTGGCTTTTAAGATAAAAGCTCAACCAAGCTTTTATATCGTTGTTCTGTGA 861 0.4855 MDASLKFTVRRREPELIAPARPTPREVKLLSDIDDQDGLRFQIPVIQFYRNDPSQGGKDAVEVIREAVAKTLVFYYPFAGRLREGRGRKLMVDCTGEGVLFIEADADVTLKQFGDALQPPFPCWEELLYDVPGSEGVLNTPLLLIQWLLTYLAVAPVRTPMSESVGIQVRFSCCARISVGLVRNSKDLQAGVLAGMSTGIDDCSLHTVTAQESFSQGMTQLTSFSQVSFDDKFLGNVLVKSKAEINQLCEDGELSPYAVPKAIDSLLGKTLAFKIKAQPSFYIVVL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3299 286 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 185 - -
Ssu7g3299 286 Gene3D - 8 182 IPR023213 -
Ssu7g3299 286 PANTHER ALCOHOL ACYLTRANSFERASE 7 185 - -
Ssu7g3299 286 Pfam Transferase family 9 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3299 Ssu-Chr7 79068256 79078011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3299 9 146 Monolignol Biosynthesis Gene Families AT5G48930 34.058 4.45e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3299 K19861 - gmx:100797017 272.322