Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3293 ATGTCCCCAAAGAGTACTTGGATTAAGTTAGATGCCACTTGTCTTTGTTCCTTACTTGATATGGACAAGTATGACCTCATGCGTCGGATTCACATAGATGCTCGTGATTTCAGAATTCTTGATTCTCCTCTCTCTTACCCCTCAACCATTCTAGGTCGAGAAAAGGCTATTGTTCTTAACTTGGAGCATGTCGAGGCAATCATCACTGCTGAAGAGGTGCTTTTGCAAGACACCACGGATGAAAATATGGTCCTTGTTGTTGAGGAACTACAAAGGAGGTTAACTATCATTCATACAAATCAAGGGGTTGGTCAAGGCAATACTAGTCATCAACGTGATACTGTAGAAGAGAAGGAGTCACCCTTTGAATTCCAGGCCTTCGAGGTAGTTTTGGAAGCAATTTGTAGTTTCCTTGCTGCACGTACAACGGAGCTTGAAATGGATTCTTATCCTGCATTAGATGAACTTACCACCCAGaCAAGTAGCCGTAATTTGGACAGAGTTCGTAAATTGAAGAATACAATGACGGGGCTGGTTGCCAGGGTTCAAAAGGTAAAAGATGAACTTGAACCATTAATGGACGATGATGATGGCATGGCTCACCTATACTTATCAAGAAAATCGTCAGGCACATTATCATCATCAATAAGTCAATCAGTTGGGTCTACCACACCCCCCTCCACAGAATCTAAACTATCCAGAGCAAATAATAGAGCAAGTGTGGCACTTTACCTTggagataaaaataatgtggAAGAGCTTGAAATGTTACTTGaggttatgatattatttagttttaataactgA 807 0.3928 MSPKSTWIKLDATCLCSLLDMDKYDLMRRIHIDARDFRILDSPLSYPSTILGREKAIVLNLEHVEAIITAEEVLLQDTTDENMVLVVEELQRRLTIIHTNQGVGQGNTSHQRDTVEEKESPFEFQAFEVVLEAICSFLAARTTELEMDSYPALDELTTQTSSRNLDRVRKLKNTMTGLVARVQKVKDELEPLMDDDDGMAHLYLSRKSSGTLSSSISQSVGSTTPPSTESKLSRANNRASVALYLGDKNNVEELEMLLEVMILFSFNN 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3293 268 Gene3D - 3 78 - -
Ssu7g3293 268 PANTHER MAGNESIUM TRANSPORTER MRS2-I 4 261 - -
Ssu7g3293 268 Coils Coil 168 188 - -
Ssu7g3293 268 CDD Mrs2_Mfm1p-like 7 259 IPR039204 -
Ssu7g3293 268 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 4 261 IPR039204 -
Ssu7g3293 268 MobiDBLite consensus disorder prediction 212 234 - -
Ssu7g3293 268 Gene3D Magnesium transport protein CorA, transmembrane region 79 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3293 Ssu-Chr7 78884525 78888249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3293 6 263 MRS2 Gene Family AT5G09690 57.471 7.22e-93 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3293 K16075 - ath:AT5G64560 278.87