Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3288 ATGCATAAGGAAACTGAGGATGAGTATACTAACCTGTCTAACTTACTTCAAGAGTTCACTAGTATTCCCAACATTGACAAGGCATGGCTTTTTAAGTCACCGGGCTTGCAGTTGCAGGGAATGTTTGCTGTTTCCCAACCAGATCTTTTAACAAACAAGAGGAGGACATCCATCGCGTCCtgtaacattttaaaagaaagtgaCAATTCTGTGGAGTTTCTGTGGGCTCCGTTTCCAATTGAGATGTCTGGCGTGTCTATGATTGTTCCATCACCTTCTGGCTCGAAGCTTTTAGTGATTCGAAATCCGGAGAATGAAGCTACTTGCTGCTTTGAGATTTGGAGTTCATCTCGAATGGAGAAGGAGTTCCACATCCCCCAATCATTGCATGGCTCAGTATACAATGATGGATGGTTTGAGGGTGTCTCGTGGAACATGGATGAAACATGTATAGCATATGTAGCAGAAGAGCCTTTTCCTGCAAAGCCCACATTTAATGATGTGGGGGGCTACAAGAAAGGTGGTTGTGCAGATAAGGATTTGGGTTACTGGAAAGGTCAAGGGGACTGGGAGGAGGACTGGGGAGAAACATATGCTGGAAAGAGACAGCCAGCACTTTTTGTTATCAACATCAACAGTGGAGACGTACAAGAAGTCAAAGGAATTGACAAATCTTTGAGTATTGGCCAAGTTGTGTGGGCTCCATTTACTGAAGGGTCGGAACAATACCTTGTTTTTGTTGGATGGTCATCTGAGCCAAGAAAGCTTGGCATTAAGTACTGCTCTAACAGGCCTTGTGCATTATATGCTGTTAGAGCACCCCATCATGAGCCGAAATCTGATGAACCAGTGCTCCAGTCAACTGAAGTATTACATGCACTGAATCTTTCTCAAACTATAAGCAGTGCCTTCTTTCCACGGTTCAGTCCAGATGGAAAGTTCCTTGTATTTTTATCTGCAAGAAGTGCTGTGGACTCTGGAGTGCACAATGCTACAAATTCACTTCATAGAATTGATTGGCCAACTGATGGAAAACTGTTCCAATCTTCCAAAATTTATGACATTATTCCTGTTGTGATGTGTGCTGAGGATGGTTGCTTCCCTGGGCTTTATTGTACTACTATCCATAATAATCCTTGGCTCTCTAACAACTGCACAATGATTATATCATCCATCTGGCACAGCAGTGAAGTTCTACTCTCTGTGAATGTGTTAAGCGGGGAAATATTACATATCAGCCCAGCAGACTCAAATTTCTCGTGGAATCTTCTTATGCTGGATGGGAACAATATTGTTGCCATTTCCAGCAGTCCAGTTGATGTTCCTCAAATCAAGTATGGAATGGCCATTGAGAAGGCGACTAGCAATACTACATGGAGTTGGTCAAATATATCCAGTCCCATATTCAGATGCTCTGACAAGGTTAGATCTCTGCTGTCCTCTCTCCAATGCAGTATACTGAGGATCACAGTAAAGGACGCTCATGATGGTCAAACAAAAGgtGCTACTGAACCTTTTGAAGCTATATTTGTGTCATCTAAAATCAAGAACAAGGATGTATTTGATCCATTAATTGTGATCCTTCATGGAGGGCCCCAAGACGTCTCTTTGTCATACTTTACAAAGTATTTGGCTTTTCTATCTTCAGTTGGATACAGCTTGCTGATTGTAAATTACAGAGGTTCGTTAGGATTTGGTGAGGAAGCATTACAATCTCTTCCAGGGAAAGTTGGGTCTcagGATGTCAATGATGTTCTCTCTGCCATAGATCATGTCATCAGCTTGGGTCTTGCCAGTCCATCTAAGATTACAGTGATGGGCATTTCACACGGTGGTTTTCTGACAACCCACTTGATTGGCCAGGCACCAGACAAGTTTGTAGCAGCTGCTGCAATCAATCCTGTTTGTAACCTTGCACTGATGACTGGAACAACCGATATCCCTGACTGGTGCTATGTAGAAGCTTGTGGAACCATTGCCAGAAATTGCTTTACTGAACCACCCTCAGCAGAAGATTTGACTCTCTTTTATAGCAAGTCTCCTATTTCACACGTCTCCAAGGTAAATGCACCAACACTTTTCCTATTAGGTGCTCAAGATCTTCGTGTTCCAATTTTTGATGGATTGCAATATGCTCGGGCTTTAAAGGAGAAAGGAGTAGAGGTCAAAATCATTATGTTTCAAAATGATGTTCATGCACTCAAAAGGTAG 2211 0.4211 MHKETEDEYTNLSNLLQEFTSIPNIDKAWLFKSPGLQLQGMFAVSQPDLLTNKRRTSIASCNILKESDNSVEFLWAPFPIEMSGVSMIVPSPSGSKLLVIRNPENEATCCFEIWSSSRMEKEFHIPQSLHGSVYNDGWFEGVSWNMDETCIAYVAEEPFPAKPTFNDVGGYKKGGCADKDLGYWKGQGDWEEDWGETYAGKRQPALFVININSGDVQEVKGIDKSLSIGQVVWAPFTEGSEQYLVFVGWSSEPRKLGIKYCSNRPCALYAVRAPHHEPKSDEPVLQSTEVLHALNLSQTISSAFFPRFSPDGKFLVFLSARSAVDSGVHNATNSLHRIDWPTDGKLFQSSKIYDIIPVVMCAEDGCFPGLYCTTIHNNPWLSNNCTMIISSIWHSSEVLLSVNVLSGEILHISPADSNFSWNLLMLDGNNIVAISSSPVDVPQIKYGMAIEKATSNTTWSWSNISSPIFRCSDKVRSLLSSLQCSILRITVKDAHDGQTKGATEPFEAIFVSSKIKNKDVFDPLIVILHGGPQDVSLSYFTKYLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLSAIDHVISLGLASPSKITVMGISHGGFLTTHLIGQAPDKFVAAAAINPVCNLALMTGTTDIPDWCYVEACGTIARNCFTEPPSAEDLTLFYSKSPISHVSKVNAPTLFLLGAQDLRVPIFDGLQYARALKEKGVEVKIIMFQNDVHALKR 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3288 736 Gene3D alpha/beta hydrolase 507 736 IPR029058 -
Ssu7g3288 736 SUPERFAMILY DPP6 N-terminal domain-like 82 443 - -
Ssu7g3288 736 ProSitePatterns Prolyl endopeptidase family serine active site. 584 614 IPR002471 GO:0004252|GO:0006508
Ssu7g3288 736 Pfam WD40-like Beta Propeller Repeat 304 328 IPR011659 -
Ssu7g3288 736 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 5 277 IPR045550 -
Ssu7g3288 736 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 4 736 - -
Ssu7g3288 736 SUPERFAMILY alpha/beta-Hydrolases 523 733 IPR029058 -
Ssu7g3288 736 Pfam Prolyl oligopeptidase family 540 734 IPR001375 GO:0006508|GO:0008236
Ssu7g3288 736 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 4 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3288 Ssu-Chr7 78720306 78728668 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3288 523 736 Carbohydrate Esterase AT5G36210 26.636 1.33e-17 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3288 K01303 - gmx:100812681 1384.78