Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3287 ATGGACAAGGAAGTTGAAGCGACGGAGCAAGAATACGCACTTCACTCCAACTTACTCCAAGAATTCACCGCCATCTCCACCGTCGACAAGGCATGGCTCTTCAAATCCAGCACCGGCTCGGCTTCGCAGGGAATGTTCTGCGTTAGTCAACCGAACCTTTTGGTCAACAAGAGAAAGAAATCCATCGTCTCCGCTACCATTCTCAGACAAAACGACGGTTCCGTCGCGTTTCAGTGGGCTCCGTTTCCGATCGAAATGTGTGGAGTCTCCGCAATGGTTCCGTCGCCTTCTGGCTCCAAACTTCTGATTGTTCGAAATCCCGAGAGCGAAGGTCCCTGCCGCTTTGAAATTTGGAGCTCCTCTAAACTCGAAAAAGAGTTCCATGTCCCTCAATCCAAGCATGGTTCCGTATACACTGATGGATGGTTTGAGGGAATCTCTTGGAATTCGGATGAAACTTGTATAGCATATGTAGCTGAGGAGCCATCCCCTGCAAAGTCCACATTCAACGATCAGGGCAGCTACAAGAAAGATAGCTCTCCAGACAAGGATTGTGGTACCTGGAAATGTCAAGGGGAGTGGGAGGAGAACTGGGGAGAGACATATGCGGGGAAGAGGCAGCCTATGCTTTTTGTCATCAACATCACCAGTGGAGAGGTACAAGCAGTCAAAGGAATTGACAAGTCTTTGAGTGTCGGACAAGTTGTGTGGGCTCCATCAACTGAAAGCTCTGCGCAATATTTGGTTTTTGTTGGATGGTCATTTGAGACAAGAAAACTTGGTATTAAGTACTGCTATAACAGGCCGTGCGCGTTATATGTTGTTAAAGCACCGCACCATGAGTCAAAAGTTAATGAAGCTGAGATTCACTCAACTGAAGATGTTCAGGCTGTTAACCTAACTCAAACCATAAGTAGTGCCTTCTTCCCACGGTTCAGCCCAGATGGAAAATTTCTTGTATTTGTATCTGCAAGAAGCTCAGTTGATTCAGGAGCCCATTCTGCTACAGATTCACTTCATAGAATTGACTGGCCAAAGGATACAAAGTTTTATCAATCTGCTAAAATTCATGaagtgattcCAGTTGTGTTGTGTGCTGAGGATGGCAACTTCCCTGGCCTTTACTGTTCAAGTATCCTTAGTGATCCATGGCTTTCTGATGGCTATACTTTGGTTATACCTTCTGTCTGGCACAGCTGTCAAGTTTTACTTTCTGTCGATGTGTTGAGTGGAGAAATATTGCGTATCACCCCCGCCTACTCAAATTTCTCTTGGAGTCTCCTCACATTGGATGGGAACAATATTCTTGCTGTTTCTAGCAGTCCAGTAGATGTTCCTCAAATCAAGTATGGAGCCATTGTTAAGACGGcagctaataataaagaatggaGTTGGTCAGATGTCTCAAATCCCATATTTAAATGCTCTGACAAGGTTAGATCCTTGATCTCCTCTCTTACATTCAGTGTAATGAAGATCTCAGTCAAGGATGTTTCTGAAAGCTTAACAAAAGGTGCTAGTCAACATTATGAAGCTATATTTGTGTCATCAAAAACTAAGAAAAGTGATGCATGTGATCCACTAATTGTGATCCTTCATGGGGGACCACACTCGGTCTCATTGTCAAGCTTTTCAAAGCCATGGGCTTATCTTTCTTCACTTGGATATAGCTTGTTAATTGTGAACTACAGAGGCTCATTAGGATTTGGCGAGGAAGCCTTGCAATCTCTTCCAGGGAAAGTTGGATCTCGGGATGTCAATGATGTACTCACTGCTATTGATCACGTCATTAACTTGGGACTTGCCAGTCCTTCAAAGATTGCAGTGCTTGGTGGCTCACATGGTGGCTTTCTAACAACCCACTTGATTGGCCAGGCACCGGAGAAATTTGTTGCAGCAGCTGCTAGAAATCCTGTGTGTAACCTTGCACTGATGGTTGGTACATCTGATATCCCTGATTGGTGCTATGTGGAGACCTATGGAATCAAGGGGAGAGATAAGTTTAACGAAGCACCTTCAGCCGAGGATCTAACTCTATTTTATAGCAAATCTCCTATTTCACACCTCTCAAAGGTAAAAACACCAACGCTTTTTCTACTAGGTGCTCAAGATCTCCGTGTTCCAATTTCAACTGGACTGCAATATGCTCGGGCTTTAAGGGAGAAAGGAGTACAAGTTAAAGTCATTGTGTTTCCAAATGATGTTCATGGAATTGAAAGGCCACAATCAGACTTTGAAAGCTACCTTAACATTGCGATGTGGTTCAACAAATATTGCAAATGA 2283 0.4363 MDKEVEATEQEYALHSNLLQEFTAISTVDKAWLFKSSTGSASQGMFCVSQPNLLVNKRKKSIVSATILRQNDGSVAFQWAPFPIEMCGVSAMVPSPSGSKLLIVRNPESEGPCRFEIWSSSKLEKEFHVPQSKHGSVYTDGWFEGISWNSDETCIAYVAEEPSPAKSTFNDQGSYKKDSSPDKDCGTWKCQGEWEENWGETYAGKRQPMLFVINITSGEVQAVKGIDKSLSVGQVVWAPSTESSAQYLVFVGWSFETRKLGIKYCYNRPCALYVVKAPHHESKVNEAEIHSTEDVQAVNLTQTISSAFFPRFSPDGKFLVFVSARSSVDSGAHSATDSLHRIDWPKDTKFYQSAKIHEVIPVVLCAEDGNFPGLYCSSILSDPWLSDGYTLVIPSVWHSCQVLLSVDVLSGEILRITPAYSNFSWSLLTLDGNNILAVSSSPVDVPQIKYGAIVKTAANNKEWSWSDVSNPIFKCSDKVRSLISSLTFSVMKISVKDVSESLTKGASQHYEAIFVSSKTKKSDACDPLIVILHGGPHSVSLSSFSKPWAYLSSLGYSLLIVNYRGSLGFGEEALQSLPGKVGSRDVNDVLTAIDHVINLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAARNPVCNLALMVGTSDIPDWCYVETYGIKGRDKFNEAPSAEDLTLFYSKSPISHLSKVKTPTLFLLGAQDLRVPISTGLQYARALREKGVQVKVIVFPNDVHGIERPQSDFESYLNIAMWFNKYCK 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3287 760 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 8 282 IPR045550 -
Ssu7g3287 760 SUPERFAMILY DPP6 N-terminal domain-like 87 444 - -
Ssu7g3287 760 Gene3D - 272 329 IPR015943 GO:0005515
Ssu7g3287 760 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 5 760 - -
Ssu7g3287 760 Gene3D alpha/beta hydrolase 452 759 IPR029058 -
Ssu7g3287 760 SUPERFAMILY alpha/beta-Hydrolases 522 759 IPR029058 -
Ssu7g3287 760 Pfam Prolyl oligopeptidase family 543 759 IPR001375 GO:0006508|GO:0008236
Ssu7g3287 760 ProSitePatterns Prolyl endopeptidase family serine active site. 588 618 IPR002471 GO:0004252|GO:0006508
Ssu7g3287 760 MobiDBLite consensus disorder prediction 164 184 - -
Ssu7g3287 760 Pfam WD40-like Beta Propeller Repeat 307 330 IPR011659 -
Ssu7g3287 760 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 5 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3287 Ssu-Chr7 78700951 78709811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3287 527 743 Carbohydrate Esterase AT5G36210 27.189 2.42e-17 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3287 K01303 - gmx:100803600 1381.31