Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3257 ATGTTGAAGAGTATAAGGAGGAGGAAGACAACTTATCAATCTCAGCCACCACAACAAGCTCCAGATCCTTGTGTTGAAGTGGGGCGGTTTGGATTAGATGGAGAGGTTGATGGGTTAAGACGTGACAAGCAAGTTCTCATGGTGGAGCTAGTGAAGCTTAGACAACAACAGCAGAACACGAGAAACCACCTTCAATCAATGGAAAGTAGGCTTAAGAAGACTGAACAGAAACAGCAACAAATGATGAAGTTCTTGGCAAGGGCAATGCAGAACCCCAATTTCTTGCAACAATTAGTTCAACAAAAGGAATGGAGGAAGGAGCTGGAGGAAGCTTTTTCCAACAAAAGAAGAAGACCTATTAATCAAGGGCCTTGTGAATGCTCAGCTTTTGTTAAACTTGAACAGCAGGAGTACAATGACATATCAGAGCTTGAAGTATCTCACATGGACCTTGTTATGAACATGGGGGGACAAAGTGGAAGCCAAAAGAACACTGAGGAGGAGAAAGGATCTGAACTTGACGGTAGCAGAAATGAAGGCTTTGAGGAAGTACTCTGGGAAGAACTTTTGAATGAGGGTACTGAAGAAGATCTACTAGGATTGGAAGAAGATGATGAGGATATAACTGTGTTGGCTGAGGAACTTGGTTATTTAGCCTCAACTCCTAAATAA 672 0.4241 MLKSIRRRKTTYQSQPPQQAPDPCVEVGRFGLDGEVDGLRRDKQVLMVELVKLRQQQQNTRNHLQSMESRLKKTEQKQQQMMKFLARAMQNPNFLQQLVQQKEWRKELEEAFSNKRRRPINQGPCECSAFVKLEQQEYNDISELEVSHMDLVMNMGGQSGSQKNTEEEKGSELDGSRNEGFEEVLWEELLNEGTEEDLLGLEEDDEDITVLAEELGYLASTPK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3257 223 Coils Coil 36 77 - -
Ssu7g3257 223 MobiDBLite consensus disorder prediction 1 24 - -
Ssu7g3257 223 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 1 212 - -
Ssu7g3257 223 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 212 IPR027725 -
Ssu7g3257 223 MobiDBLite consensus disorder prediction 155 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3257 Ssu-Chr7 77968457 77969128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3257 1 221 HSF AT3G22830 46.565 1.32e-60 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3257 K09419 - qsu:112016413 246.514