Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3238 ATGGGAATAAGAGATTTTCATATCAAGCTTAAGGCATTCCGGGTGAAACGTTTTTTCTTTGGCAGAAGGAGAAATAAATGGAATGCGAACAAGCCTTCATGGATGATTCCAATAACACATGGTCATCATGTGGTGGAGCATCATGCAATCAAAGGTGGTTCTGATGACTCGGACTTCGATTCAGTTGTGATACAGAGGGAACAAATGGATCACAATGAACTGTGGTATTTTGGAATCTTTGATGCTGTAGTTGGAGATGGAGTTACCAAGTATATGCAATCCCATTTCTTTGGCAAGAAGCTCAAAGAGTGTCATATGAGGAGAAAAACCAAAGAAACACTGAAGAGAGCTTACCTAGGTGTAAGGACAAAGATCAGAGAGGCACACAAGCCAGAGGAGGAGACATGCAGAATAGGTTCAACATCAGTGATGGTGATAAATGGAGAAAAGCTTGTGATAGCCAACATGGGAGATTACAGAACTGTTTTGTGCAGAGATGGTGTAGCTTATCAGACATCTGGAAGACACAATCAATCAGCCCAGAGACATTGGTACCGCAGACTCTTTTCAGTACGCATGATAGCATGTGAATCAGGCAATACAACAGGTACAAAGTATTCTAAAGGCTCAGAACTTGTGGTGGGAGGTGATAGGATCGACTCTGATACTGAATTTTTGATCTTAGCAAGCAATGGCATATGGGAGGTGATGAAGAACCAAGAGGCTGTGAATCTTATAAGACACATAGAGGATCCACAGGAAGCGGCTAAGTGCTTGGCAAAGGAAGCTTTGATTAGGATGAGCAAAAGCAACATTTCATGCTTAGTCATTCGCTTTGACTGA 843 0.4199 MGIRDFHIKLKAFRVKRFFFGRRRNKWNANKPSWMIPITHGHHVVEHHAIKGGSDDSDFDSVVIQREQMDHNELWYFGIFDAVVGDGVTKYMQSHFFGKKLKECHMRRKTKETLKRAYLGVRTKIREAHKPEEETCRIGSTSVMVINGEKLVIANMGDYRTVLCRDGVAYQTSGRHNQSAQRHWYRRLFSVRMIACESGNTTGTKYSKGSELVVGGDRIDSDTEFLILASNGIWEVMKNQEAVNLIRHIEDPQEAAKCLAKEALIRMSKSNISCLVIRFD 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3238 280 SUPERFAMILY PP2C-like 55 280 IPR036457 -
Ssu7g3238 280 Gene3D - 43 280 IPR036457 -
Ssu7g3238 280 Pfam Protein phosphatase 2C 70 179 IPR001932 -
Ssu7g3238 280 Pfam Protein phosphatase 2C 218 272 IPR001932 -
Ssu7g3238 280 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 6 279 - -
Ssu7g3238 280 ProSiteProfiles PPM-type phosphatase domain profile. 56 279 IPR001932 -
Ssu7g3238 280 SMART PP2C_4 37 277 IPR001932 -
Ssu7g3238 280 CDD PP2Cc 60 279 IPR001932 -
Ssu7g3238 280 PANTHER ALPHABET, ISOFORM E-RELATED 6 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3238 Ssu-Chr7 77249352 77251455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3238 1 279 PP2C-type Phosphatase Gene Family AT3G23360 48.227 1.90e-83 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3238 K19704 - gmx:100794054 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g3238 7 77249352 77251455 Ssu7g3238 7 77249352 77251455 ECH