Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3200 ATGGAGGTGTCAAGTGCCAACGTTGCAGAGAGGGACaaagACTACAAGTATCTTCCACTGGAGGCAATTCTGTTTGAGCACTATGGGCGGCAATCGGTGGTCTCAAGTTCGACTCCTGGcTGCAAACAATGCCATACCATATTTCTTCATCCTACCACTTCTTTACTTTCAGTCTGGTTTGACAAGAAGGACACAATGTACCACTTCACTGCAATTGTGATAGCTGGAATGGGTTTCTTCACTGATGCCTATGACCTCTTCTGCATTTCCCTAGTCACCAAGCTGCTAGGGAGGCTATATTACACAGAACCAGGTGCACCAAAGCCAGGAACGCTTCCTCCAAGAGTTCAATCTTCTGTGACTGGTGTTGCACTATGTGGTACCTTGGCTGGCCAGCTATTCTTTGGTTGGCTTGGTGACAAATTGGGAAGGAAAAAAGTCTATGGTATAACTCTTATTCTCATGGTAGTGTGCTCCCTTGCCTCAGGACTCTCCTTTGGGTCAACGCCAAAGGGTGTCATGGCCACACTTTGTTTCTTCAGGTTCTGGCTTGGGTTTGGGATTGGTGGTGACTACCCCCTTTCTGCCACAATCATGTCTGAATACGCCAACAAAAAGACTCGTGGCGCATTCATAGCTGCAGTGTTTGCCATGCAAGGATTTGGAATCTTGGCTGGTGGAGTAGTTGCCTTGACTGTTGCACATGCATATGACCAAAACTACAAGGTTCCTAGTTATGAACAAAATCCAGAAGCATCCTTGGTGCCTGCATTTGACTATGTTTGGAGAATAATTTTGATGTTTGGTGCAATCCCAGCTGCACTCACCTTCTACTGGCGCATGAAAATGCCAGAGACAGCACGTTACACAGCCCTTGTGGCCAAGAATGCAAAACAAGCTGCTGCGGACATGTCTAAGGTATTGCAAGTGGAAATTGAAGCCGAAGAGGAAAAGTTGCAGAAAATGACAGAGAGTGAAGGCAACAAGTATGGTTTGTTCAGCAAGGAATTTGTGAGACGCCATGGCCTGCCTTTGGTGGGAACCACCACCACTTGGTTCTTGTTGGACATAGCATTCTACAGTCAGAACCTTTTCCAAAAGGACATTTTCAGTGCAATTGGGTGGATTCCTCCAGCAAAGGAAATGAATGCAATCCATGAGgTGTACAAGATTGCAAGAGCACAAGCACTTATAGCACTGTGCAGTACTGTGCCAGGTTACTGGTTCACAGTGCTGTTTATTGATTACATGGGCCGTTTTGCTATCCAATTGATGGGGTTCTTCTTCATGACTCTGTTCATGTTTGCTTGGGCCATACCATATGATCATTGGactaagagagaaaatagatttGGGTTTGTGGCAATGTACTCACTTGCCTTTTTCTTCTCCAACTTTGGTCCAAATGCAACCACATTTGTTGTGCCAGCAGAGATTTTCCCTGCAAGGCTAAGGTCCACTTGTCATGGAATCTCTGCTGCCGCAGGAAAGGCTGGCGCAATTGTGGGCGCATTTGGATTCCTATATGCTGCACAAAGTAAGGACCCTAAAAAGACTGATGCAGGGTACCCTACTGGGATTGGGATTAAGAACTCCCTCCTTATGCTTGGTGTGATAAACTTCTTTGGGATGTTACTCACCTTGCTGGTTCCTGAATCAAAGGGAAAATCACTGGAGGAGTTGAGTGAGGAGAATGATGAAAATGGTGAACATGCAATGTCTGTTAGGACAGCTCCTGTTTGA 1743 0.4538 MEVSSANVAERDKDYKYLPLEAILFEHYGRQSVVSSSTPGCKQCHTIFLHPTTSLLSVWFDKKDTMYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRLYYTEPGAPKPGTLPPRVQSSVTGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVVCSLASGLSFGSTPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGVVALTVAHAYDQNYKVPSYEQNPEASLVPAFDYVWRIILMFGAIPAALTFYWRMKMPETARYTALVAKNAKQAAADMSKVLQVEIEAEEEKLQKMTESEGNKYGLFSKEFVRRHGLPLVGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKEMNAIHEVYKIARAQALIALCSTVPGYWFTVLFIDYMGRFAIQLMGFFFMTLFMFAWAIPYDHWTKRENRFGFVAMYSLAFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPKKTDAGYPTGIGIKNSLLMLGVINFFGMLLTLLVPESKGKSLEELSEENDENGEHAMSVRTAPV 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3200 580 MobiDBLite consensus disorder prediction 559 580 - -
Ssu7g3200 580 CDD MFS_PhT 72 554 - -
Ssu7g3200 580 Pfam Sugar (and other) transporter 72 563 IPR005828 GO:0016021|GO:0022857|GO:0055085
Ssu7g3200 580 Gene3D MFS general substrate transporter like domains 67 314 IPR036259 -
Ssu7g3200 580 Gene3D MFS general substrate transporter like domains 317 577 IPR036259 -
Ssu7g3200 580 TIGRFAM 2A0109: phosphate:H+ symporter 66 564 IPR004738 GO:0005315|GO:0006817|GO:0016021
Ssu7g3200 580 Coils Coil 305 325 - -
Ssu7g3200 580 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 63 574 - -
Ssu7g3200 580 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 63 574 - -
Ssu7g3200 580 ProSiteProfiles Major facilitator superfamily (MFS) profile. 71 555 IPR020846 GO:0022857
Ssu7g3200 580 SUPERFAMILY MFS general substrate transporter 62 564 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3200 Ssu-Chr7 75980500 75988072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3200 63 570 Inorganic Solute Cotransporters AT3G54700 77.756 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3200 K08176 - gmx:100780201 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1234 4 19640806 19642428 Ssu7g3200 7 75980500 75988072 PCT