Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3199 ATGGAACGTGGGGTTCTTGATGGTATCATCAATAGGCTGCTTCAGGTCAGAGGGAGACCTGGGAAACAGGTGCAGCTTTCAGAGGCAGAAATCAGGCAGCTTTGTGTGGTCTCTAGAGATATCTTTCTGAAGCAGCCCAATCTGTTGGAACTCGAGGCACCAATTAAGATATGTGGGGACATCCATGGTCAATATTCTGACCTTCTGAGACTTTTTGATCATGGTGGATTGCCTCCTCGCTCCAACTACTTATTCTTAGGGGATTATGTGGATCGTGGAAAGCAAAGTCTTGAGACAATATGTCTTCTTTTGGCCTACAAGATAAAATACCCTGAgaactttttccttcttagggGCAATCATGAATGTGCTTCCATAAATCGCATCTATGGCTTCTATGACGAATGTAAACGGCGATTCAATGTCAGGCTATGGAAAATATTTGCAGATTGTTTCAACTGCTTGCCTGTGGCAGCtatcattgatgaaaaaatattcTGTACGCATGGTGGACTCTCTCCTGAATTGCACAATCTAAGTCAGATAAGTAGTTTGCCGCGCCCAACAGAAGTACCTGATAGTGGTCTACTGTGTGATCTCTTGTGGTCTGATCCGAGTAAGGACATTGATGGTTGGGGAGAGAATGAACGTGGAGTTTCATATACTTTTGGTGCTAGCAGGGTGACAGAATTTCTTCGAAAGCATGATCTTGACTTGATTTGTAGAGCACACCAGgtTGTTCAAGATGGATATGAATTTTTTGCTAATAGGCAACTTGTGACTATCTTTTCTGCACCTAACTACTGTGGAGAGTTTGACAATGCTGGAGCAATGATGACTGTTGATGAGACACTTACGTGCTCTTTTCAGATATTAAGGCCTGTGGAACCCAGAAAGCCTAAGTTTGGTTTTGGGAACAGAACTACATTCAAGGCAATTCTTGATGCTGCTAGAGTATAA 960 0.4135 MERGVLDGIINRLLQVRGRPGKQVQLSEAEIRQLCVVSRDIFLKQPNLLELEAPIKICGDIHGQYSDLLRLFDHGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFADCFNCLPVAAIIDEKIFCTHGGLSPELHNLSQISSLPRPTEVPDSGLLCDLLWSDPSKDIDGWGENERGVSYTFGASRVTEFLRKHDLDLICRAHQVVQDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMTVDETLTCSFQILRPVEPRKPKFGFGNRTTFKAILDAARV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3199 319 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 317 - -
Ssu7g3199 319 SUPERFAMILY Metallo-dependent phosphatases 18 298 IPR029052 -
Ssu7g3199 319 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Ssu7g3199 319 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Ssu7g3199 319 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Ssu7g3199 319 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Ssu7g3199 319 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Ssu7g3199 319 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Ssu7g3199 319 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Ssu7g3199 319 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Ssu7g3199 319 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Ssu7g3199 319 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Ssu7g3199 319 SMART pp2a_7 26 296 IPR006186 GO:0016787
Ssu7g3199 319 Gene3D - 2 302 IPR029052 -
Ssu7g3199 319 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 317 - -
Ssu7g3199 319 CDD MPP_PP1_PPKL 5 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3199 Ssu-Chr7 75973320 75979612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3199 33 239 Calmodulin-binding Proteins AT5G63870 30.769 2.00e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3199 K06269 - gmx:100780047 627.091