Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3181 ATGAGTTACAGAAGCCTGGGTTTGTACTTTAAGTTTGGGCCTAAAGGCCAGAAGTTTTGCTTTCATTTATTATCGGGGCTTGTGCTACTTTTCTTCAGTTCTCAAGGCCTCAGaGATAATCGCTCCTCCAGATCATCACTTGTAGATGGTTTTGATAGTCTGGAGGAGGGCGGTCTAAGGGCTTCTTCTTCTTACTCACGTGAAATTAACGAGCATGATAATGATAAAGCCATAGAGAGTTTGCAGGACAGAGTTTCTTTTCTGAAACGATTAACAGGTGATATACATGAGGAGGTTGAGAGTCATAACCAATTGCTTGATCGGGTGGGTAACAAAATGGATGGATCAAGAGGTATGATGATGGGAACCATGGATCGATTCAAGAAGGTTTTTGAGAAGAAATCAGCGAGGAAAACATGCTCACTTGTGGCATATTTCACAGTTGCCTTCATATTCATATACTATCTTATTAGGATGCTGGGATATTTTACACTTGGGTAA 501 0.4072 MSYRSLGLYFKFGPKGQKFCFHLLSGLVLLFFSSQGLRDNRSSRSSLVDGFDSLEEGGLRASSSYSREINEHDNDKAIESLQDRVSFLKRLTGDIHEEVESHNQLLDRVGNKMDGSRGMMMGTMDRFKKVFEKKSARKTCSLVAYFTVAFIFIYYLIRMLGYFTLG 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3181 166 Gene3D - 75 139 - -
Ssu7g3181 166 CDD SNARE_Bet1 71 129 IPR039899 -
Ssu7g3181 166 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 68 130 IPR000727 -
Ssu7g3181 166 SUPERFAMILY SNARE fusion complex 67 130 - -
Ssu7g3181 166 PANTHER GOLGI SNARE BET1-RELATED 37 160 IPR039897 GO:0015031|GO:0030173
Ssu7g3181 166 PANTHER BET1-LIKE SNARE 1-2 37 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3181 Ssu-Chr7 75328109 75332878 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3181 K08504 - gmx:100818014 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1249 4 20037132 20040130 Ssu7g3181 7 75328109 75332878 PCT