Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3162 ATGGCAACAAGTGAAGAAGTGGTTGCGGCGGCGCCGGCACCGGCACCGGCGCCGGAGGCAGGGCTGAAGCACAAGCTGGAGAGAAAATGGACGTTTTGGTGCGACAACCAATCCAAACCCAAACAGGGCGCTGCTTGGGGAACCTCTCTTCGCAAGGTCTACACCTTCGACACCGTTGAAGAGTTTTGGTGTTTGTATGATCAGATATTCAAGCCCAGCAAGTTGCAAAACAATGCAGATTTTCACTTGTTCAAGACGGGGATTGAACCAAAGTGGGAAGATCCCGAGTGTGCCAATGGAGGAAAGTGGACTGTCGCCAACAACAGCAGCAGGAAGGCTAACCTTGATAACATGTGGCTTGaaactCTGATGGCTTTGATTGGGGAGCAATTTGAGGCTGCTGAGGATATATGTGGCGTGGTTGCGAGTGTGCGCCAGTGGCAGGACAAACTTTCATTGTGGACAAAGACAGCGGCAAATGAGGCTGCCCAGATGAGCATTGGAAGGAAGTGGAAGGAAATCATTGATGTTAACGACAAGATAACATATAACTTTCATGATGATTCTAGAACTAAAGGAGCAACAAAGGGACGATACACCGTATAA 606 0.4901 MATSEEVVAAAPAPAPAPEAGLKHKLERKWTFWCDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLYDQIFKPSKLQNNADFHLFKTGIEPKWEDPECANGGKWTVANNSSRKANLDNMWLETLMALIGEQFEAAEDICGVVASVRQWQDKLSLWTKTAANEAAQMSIGRKWKEIIDVNDKITYNFHDDSRTKGATKGRYTV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3162 201 SUPERFAMILY eIF4e-like 16 194 IPR023398 -
Ssu7g3162 201 MobiDBLite consensus disorder prediction 1 20 - -
Ssu7g3162 201 ProSitePatterns Eukaryotic initiation factor 4E signature. 80 103 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Ssu7g3162 201 Gene3D RNA Cap, Translation Initiation Factor Eif4e 18 201 IPR023398 -
Ssu7g3162 201 PANTHER BNAA05G12740D PROTEIN 5 192 - -
Ssu7g3162 201 Pfam Eukaryotic initiation factor 4E 25 183 IPR001040 GO:0003723|GO:0003743|GO:0006413
Ssu7g3162 201 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 5 192 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3162 Ssu-Chr7 74756697 74761807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3162 1 201 Eukaryotic Initiation Factors Gene Family AT5G35620 64.563 2.46e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3162 K03259 - gmx:100499799 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g3162 7 74756697 74761807 Ssu7g3162 7 74756697 74761807 ECH