Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3160 ATGAAAGGAATCAAGGGTCGCCTCAACAGATTGCTGTCTGCTTGTGTTGGTGACATGGTCATGGCTACTGCAAAAAAAGGGAAGCCTGATCTTAGAAAGAAGGTATTGCCAGCTGTAATTGTGAGACAGCGCAAGCCATGGCGAAGAAAGGATGGTGTCTACATGTTCTTTGAAGATAACGCAGGTGTTATTGTAAATCCTAAGGGAAAAATGAAAGGTTCTGCCATAACTGGGGCTATTGGGAAGGAGTGTGCTGATCTGTGGCCTAGAATTGCAAGTGCTGCCAATGCCATTGTTTGA 300 0.45 MKGIKGRLNRLLSACVGDMVMATAKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMFFEDNAGVIVNPKGKMKGSAITGAIGKECADLWPRIASAANAIV 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3160 99 Gene3D Ribosomal protein L14 1 99 IPR036853 GO:0003735|GO:0005840|GO:0006412
Ssu7g3160 99 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 99 IPR000218 GO:0003735|GO:0005840|GO:0006412
Ssu7g3160 99 ProSitePatterns Ribosomal protein L14 signature. 38 64 IPR019972 -
Ssu7g3160 99 Pfam Ribosomal protein L14p/L23e 12 99 IPR000218 GO:0003735|GO:0005840|GO:0006412
Ssu7g3160 99 PANTHER - 1 99 - -
Ssu7g3160 99 SUPERFAMILY Ribosomal protein L14 2 99 IPR036853 GO:0003735|GO:0005840|GO:0006412
Ssu7g3160 99 SMART Ribosomal_L14_2 2 99 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3160 Ssu-Chr7 74687062 74692712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3160 1 99 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 92.929 7.53e-64 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3160 K02894 - cpap:110815904 191.045