Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3147 ATGTCTCTGCCAGACTGTCCCGCGGCCCAACTGGCCCAATTCCTGGGCCCAAACTCCACGAACGCGTCCGGCGCGGCGTCCCTGATCTGCGAGCAGTTCGCGGCCGTGGGCAACAGGTTCAAGGACACGGCCTTCGCCGTGGACAACACCTACCTCCTCTTCTCGGCGTACCTCGTGTTCTCGATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCGGTCCGCGCCAAGAACACGATGAACATCATGCTGACCAACGTCCTCGACGCGGCCGCCGGCGGCCTCTTCTACTACCTCTTCGGCTTCGCCTTCGCCAACTTCCTCTACCAGTGGGCCTTCGCCATCGCCGCCGCCGGCATCACCAGCGGCTCCATCGCCGAGCGCACCCAGTTCGTCGCCTACCTCATCTACTCCTCCTTCCTCACCGGCTTCGTCTACCCCGTCGTCTCGCACTGGTTCTGGTCCGCCGACGGCTGGGCCTCCGCCTCCAACACCGGCAACCTCCTCTTCTCCACCGGCGTCATCGACTTCGCCGGCTCCGGCGTCGTCCACATGGTCGGCGGCGTGGCCGGCCTCTGGGGCGCCCTAATCGAGGGCCCCAGAATCGGCCGCTTCGACCACTCCGGCCGCGCCGTCTCCCTGCGCGGACACAGCGCCAGTTTAGTCGTTCTCGGAACCTTCATGCTTTGGTTCGGTTGGTACGGTTTTAACCCCGGCTCGTTCAACAAGATATTAGTAACTTACGGCGGTAATTCCGGGAATTACTACGGTCAATGGAGCGCGGTTGGGAGAACCGCGGTTACCACTACTCTTGCCGGGTCAACGGCCGCGTTGACTACTCTTTTCGGGAAACGGGTGATATCCGGTCACTGGAACGTGACCGACGTTTGCAACGGCTTGTTAGGCGGTTTCGCCGCGATAACGGCCGGTTGTTCGGTCGTGGAGCCGTGGGCGGCGATCGTGTGCGGGTTTGTCGCGTCCGCTGTTTTGATTGGGTGTAACAAGTTAGCGGAGAAGGTTAAGTTTGACGACCCGCTGGAGGCGGCGCAGCTGCACGGGGGGTGCGGCGCGTGGGGGGTGCTGTTCACGGCGCTGTTTGCGAAGGAGGAGTACGTCAACGAGGTTTACAGCGGCGGGGGCGTGGGGCACGGGCTGTTCATGGGGGGTGGGGGGAAGCTGCTGGCAGCCCACGTGATTCAGATTTTGGTGATTGTTGGGTGGGTGAGTGCTACCATGGGCCCGCTGTTTTGGGCCTTGAACAGGTTGAGCCTGCTGAGGATCTCCGCGGAAGACGAGCTCGCGGGCATGGATCTGACCCGGCACGGAGGGTTCGCGTACGCGTACGAGGACGACGACGCGCACAAGCACGGGATTCAGTTGAGGAAGGTTGGACCCAACTCGTCTTCCACACCCACCACTGATGGGTga 1428 0.6289 MSLPDCPAAQLAQFLGPNSTNASGAASLICEQFAAVGNRFKDTAFAVDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFANFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASASNTGNLLFSTGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHSGRAVSLRGHSASLVVLGTFMLWFGWYGFNPGSFNKILVTYGGNSGNYYGQWSAVGRTAVTTTLAGSTAALTTLFGKRVISGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVASAVLIGCNKLAEKVKFDDPLEAAQLHGGCGAWGVLFTALFAKEEYVNEVYSGGGVGHGLFMGGGGKLLAAHVIQILVIVGWVSATMGPLFWALNRLSLLRISAEDELAGMDLTRHGGFAYAYEDDDAHKHGIQLRKVGPNSSSTPTTDG 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3147 475 Pfam Ammonium Transporter Family 105 446 IPR024041 GO:0008519|GO:0016020|GO:0072488
Ssu7g3147 475 Pfam Ammonium Transporter Family 51 105 IPR024041 GO:0008519|GO:0016020|GO:0072488
Ssu7g3147 475 PANTHER AMMONIUM TRANSPORTER 104 468 - -
Ssu7g3147 475 PANTHER AMMONIUM TRANSPORTER 5 105 - -
Ssu7g3147 475 ProSitePatterns Ammonium transporters signature. 176 201 IPR018047 GO:0008519|GO:0016020|GO:0072488
Ssu7g3147 475 Gene3D Ammonium transporter AmtB like domains 29 463 IPR029020 -
Ssu7g3147 475 SUPERFAMILY Ammonium transporter 47 427 - -
Ssu7g3147 475 TIGRFAM amt: ammonium transporter 105 446 IPR001905 GO:0008519|GO:0016020|GO:0072488
Ssu7g3147 475 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 104 468 - -
Ssu7g3147 475 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 5 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3147 Ssu-Chr7 74342560 74344069 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3147 6 472 Inorganic Solute Cotransporters AT4G13510 75.498 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3147 K03320 - gmx:100818774 828.165