Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3139 ATGAACTGTGACACCCTCCTGAGATCAAGCAAGAAGCCTACAATCATAGCCATTGCTTGCATTTTCTTTCCAATGTTGGTGGGGGCTGGTTTTCTTGCTCTTGACCATAGCATATCAGGTGGAAACTCTACTGTTACCGCTAAAGGGTATTTGTTTTGGTGTGCAATTCTTCCTGTCACGGGTTTTCCAGTCCTTGCTAGGCTCCTATCAGGGCTCAAGATCCTCTACACAAGGCTTGGCAAAGATGCCTTAACAGCAGCCATGTTAATTGATGCATATGGGTGGGTTTTGTTCACAATCTTGATTCCTTATTCCAACGAGGGTGGAAAGCCACTCCTCTCAGCAATGAGCACCTTGCTGTTCATTGTGTTCTGCTTCTGTGTGGCGCGTCCCATCTTAACTCGCGTGATCGAACACAGAATCAGGATGGGGACATGGGACTCCTCAAAGATGCTGGATGTGATGATTGGACTTCTGGTTTGTTCATACATCACAGATTTGCTTGGCACACACCATGTTGTTGGGGCCTTTGTGTATGGACTAATTTTGCCTGGTGGGAAATTTGCTGATTTGATGATGGAAATATTGGATGATTTTGTTACTGAGATTATTGCTCCTGTCTACTTTTCTAGTTTTGGCTTTAGACTACACCTGGAGGCGCTTTGGACTCAATCATACACGGGTTTATTTTCGATTGTCATGGTGGTGTTGTTAGCCATCCCAAAAGTTTTAAGCTCTATGATGGTAACATTCTTCTTTGGTGTGTCTGCTAGAGATGGATTGGGCCTCGGATTGCTCCTGAACACCAAGGGCATGATGGCTGTGCTTATGCTAAGCGTTGCCTGGGACAAAACTcTTTTGGACCCTTATGCATTCACAATTATGATGCTTGCTATCCTATTCATGTCAGTGATGGTCTCTCCCTTGATCAATGTGATATACAAGCCAAAATTCCGGTTTCTGCAAACCCAGCTGAAGACAGTACAGAAGCTAAGGTGTGATGCAGAACTTCGAGTTGTGGCCTGTGTCCACAATGCTCACCAAGTCACTGGCATGATCCATGTCCTTGAAGCCACAAATGCCACCAGAATTTCACCTTTGCATATCTCAGTTCTTCACCTTGTGGAACTCACTAGACATGGCACTGGCCTTCTTGTTACCCAAATGGAGAATTCAACTGTTCAAGGGGGATCATCAGAGAGCCATTATAGATCACAAGAGGAGTTTGAGATCATAGCCCAGGCATTTGAGGTGTTTGTGGAGGAATACAATGCAGTTAGATTTGAGACATCAAGTGTTGCGTCAACCTATAAAACCATCCATGAGGACATATACAATGCAACAGAAGAGAAACGCGGATgcctaattctccttccctttCACAAACAGCCAAGCTCAGAAGGTGTACTAGAAGTAACCAACGATGCATTCAGTGACATAAACCAAAATGTGCTGCAACAACCACCTTGTTCTGTGGGGATCTTTGTGAACCGCGGACTCAGGTCattgttgaaaacaaaaatgagcATCATTGTGATCTTCACTGGAGGCCCTGACAACTGCGAAGCCTTGTCGGTTGCTTGGAGAATGGCAGGGCATTCAGGCACACAGTTGCATGTGGTGAGGCTTCTTGTGTTAGGTAGTGAGGCTGCAGAAGAGGAGGCATTCCACTGGGATTAG 1680 0.4435 MNCDTLLRSSKKPTIIAIACIFFPMLVGAGFLALDHSISGGNSTVTAKGYLFWCAILPVTGFPVLARLLSGLKILYTRLGKDALTAAMLIDAYGWVLFTILIPYSNEGGKPLLSAMSTLLFIVFCFCVARPILTRVIEHRIRMGTWDSSKMLDVMIGLLVCSYITDLLGTHHVVGAFVYGLILPGGKFADLMMEILDDFVTEIIAPVYFSSFGFRLHLEALWTQSYTGLFSIVMVVLLAIPKVLSSMMVTFFFGVSARDGLGLGLLLNTKGMMAVLMLSVAWDKTLLDPYAFTIMMLAILFMSVMVSPLINVIYKPKFRFLQTQLKTVQKLRCDAELRVVACVHNAHQVTGMIHVLEATNATRISPLHISVLHLVELTRHGTGLLVTQMENSTVQGGSSESHYRSQEEFEIIAQAFEVFVEEYNAVRFETSSVASTYKTIHEDIYNATEEKRGCLILLPFHKQPSSEGVLEVTNDAFSDINQNVLQQPPCSVGIFVNRGLRSLLKTKMSIIVIFTGGPDNCEALSVAWRMAGHSGTQLHVVRLLVLGSEAAEEEAFHWD 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3139 559 PANTHER CATION/H(+) ANTIPORTER 21-RELATED 1 549 - -
Ssu7g3139 559 Pfam Sodium/hydrogen exchanger family 4 309 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu7g3139 559 Gene3D - 1 319 IPR038770 -
Ssu7g3139 559 PANTHER CATION/H + ANTIPORTER 1 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3139 Ssu-Chr7 74103118 74105149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3139 1 550 Antiporter Super Family AT2G13620 34.821 1.59e-108 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3139 - - gmx:100792990 849.351