Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3123 ATGACTAGTCCTGCAGAAGAGCAttcttcttcatcctcttcaaaAGGCGAACCCACCCCTCCAGAGCCATTGAAGCTGAAGCGGGGCGTGAAGAGGAAGCTCCTGACAGACTCTGACGTTGGAAACGAGATTTTGGCGATAGAGGATGGTAGCAGCACAAGTAAGAAGCTTGCCATGTTCCAACGAATATGGAGCgagagagaaattttgaaagtgttaGCGGAGTTCGTTGCGGACACCGGCTTGGAGCCTTACAAAGAGGTCTACGCATTTCATGATTTCTTGAAAAAATCAAAGCCCCATTGCGTCAAGTCTTCAACTCTCCAACTGAATGAGAAGATTCGTAGGATGAAAAAGAAGTTCATGAACTCCACCAAAGGAAAAAGCAAGAGTAAGTTCGATTTCGAGATCCTTCAGCTGTCCCAGAAGGTTTGGCCCAAGAAAGCTGGGCCCGCCGCTTTGGAGGCTTTGCAGAAGAGGGATGTTGAGTCGGAGATGAGGGTTTTGGAATGTGAAGGCAAGAAGATGTTTGGACATGGGCCGATGGACGAGGAGCTTTGGAAGCGGGGCATTCGGTGTCTTGACGGCCCAAGGTGGTGGAATTGGCGGAGGAGTGGAAGAAGCTGCGCATGGCTGAGATGA 642 0.4735 MTSPAEEHSSSSSSKGEPTPPEPLKLKRGVKRKLLTDSDVGNEILAIEDGSSTSKKLAMFQRIWSEREILKVLAEFVADTGLEPYKEVYAFHDFLKKSKPHCVKSSTLQLNEKIRRMKKKFMNSTKGKSKSKFDFEILQLSQKVWPKKAGPAALEALQKRDVESEMRVLECEGKKMFGHGPMDEELWKRGIRCLDGPRWWNWRRSGRSCAWLR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3123 213 PANTHER BNAANNG10740D PROTEIN-RELATED 9 157 IPR007592 GO:0006355
Ssu7g3123 213 MobiDBLite consensus disorder prediction 1 30 - -
Ssu7g3123 213 Pfam Protein of unknown function, DUF573 60 145 IPR007592 GO:0006355
Ssu7g3123 213 PANTHER STOREKEEPER PROTEIN 9 157 - -
Ssu7g3123 213 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3123 Ssu-Chr7 73286131 73286772 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3123 55 154 GeBP Transcription Factor Family AT1G61730 37.383 2.29e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Ssu7g3123 DUF573 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3123 - - aprc:113858278 87.4261