Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3097 ATGCTTAACAGCTTGAAAGAACTGGTTTTATGGGGAAACCAGTTGTCAGGACCTATTCCTAAAGAGATTGGGAATTGTAGCAGTCTTGAGAACATTGCTTTATATGGGAATAATCTTGTTGGACCTATACCTAAGGAAATTGGGAACCTCAAATCAGTGAGGTGGCTGTATCTTTACAGAAACAAGTTGAATGGAACCATTCCAAGGGAAATTGGAAATCTTTCTTCATGTTTAGACATTGATATCTCAGAGAACTCTTTAGTTGGTGATATCCCTTCAGAGTTTGGCAAAATAAGTGGTCTAAGTTTGCTCtttctctttgaaaaccatCTAACCGGTGTTATACCAAATAAGTTTAGTAGCCTGAAGAATTTGACAAAGCTGGACCTGTCAATAAATAATCTCACAGGTCCAATTCCATTGGGCTTCCAATATTTGACTAAAATGTATCAATTGCAACTTTTTGACAACTCCCTAAGTGGTATTATTCCTCAGGGACTTGGACTTCATAGTCCTCTTTGGGTGGTTGATTTTTCTGACAACAAATTGACAGGAAGAATACCTCCTCATCTATGCCGAAATTCTCGCTTGATGTTGTTGAATCTGGCAACTAATCAGCTTTATGGAAATATTCCAACAGGGATACTAAACTGTGAATCATTGGCACAGTTGTTGTTACTTGGAAACAGGCTCACTGGCAGCTTCCCTTCAGAATTGTGTAAGCTGGAGAAGTTGATTGCCATTGATTTGAATGAGAACATGTTCAGTGGTCCTCTCCCTGCTGACATTGGCAACTGCCACAAGTTGCAAAGGCTTCATATTGCAAACAATTACTTCACATTGGAGTTGCCTAAGGAAATAGGAAACCTCTCTCAATTGGTGACCTTTAATGTTTCATCAAATCTTTTCACTGGAAGAATCCCTCCAGAAATTTTTTGGTGTCAAAGGCTACAGCGGCTTGATCTTAGTCAGAATAACTTTTCTGGTTCCTTGCCAGATGAGCTTGGAACACTTCAGCACTTGGAGATTCTCAAGCTCTCAGACAATAAGCTTTCTGGATATATTCCTGCAGCATTAGGCAATCTGTCTCATTTGAACTGGTTGTTGATGGATGGCAATTATTTTTTCGGTGAAATACCTGCTCAGTTGGGTTCTCTTTCAAGCTTGCAAATTGCAATGGATCTCAGTTACAATAACCTTTCTGGAAGAATACCAGTTCAGCTTAGCAATCTCAACATGCTTGAATATCTCTTTCTCAACAACAACCATTTGGATGGTGAAATTCCCGGCTCATTTGAAGAGCTTTCAAGCTTGTTGGGATGCAATTTCTCATACAATAACCTCTCTGGACCTATTCCTTCCACTAAAATTTTCCGAAGTATGGCTGTAAGCAGCTATATTGGTGGTAACAATGGCCTCTGTGGTGCACCTCTCAGCGCCTGCGGTACCGATCCATCTTCTCGCTCTTCTGGGGAAAGTTTTGATTCTCCTCGCGCTAAAATGGTCATGATCATTGCAGCTTCTGTTGGAGGTGTTtcactcattttcattttagttattttatattttatgagacGTCCTCGGGAGTTTGTTGATTCTTTTGGAAGCACTGAGCCTCCCTCCCCAGATTCAGATATCTATTTCCCTCCAAAGGAAGGTTTCACATTCCATGATCTAGTTGAAGCTACAAAAAGATTTCATGAAAGTTATGTTATTGGTAAGGGAGCATGTGGAACTGTTTATAAGGCAATGATGAAATCTGGTAGGACCATTGCTGTTAAGAAGTTAGCATCTAACCGGGAAGGGGACAACATTGAGAATAGTTTCAGGGCTGAAATATCGACTCTGGGAAGGATAAGGCATCGGAATATAGTGAAATTGTATGGCTTTTGCTATCACCAGGGTTTCAATCTCCTGATTTATGAGTACATGGAAAGAGGTAGCTTAGGTGAACTATTGCATGGTTCCGCAACTACTTTGGAGTGGTCAACTCGGTTCATGATTGCTCTTGGAGCTGCTGAGGGTCTTGCCTACTTGCATCATGACTGCAAACCAAAGATTATTCACCGCGACATAAAATCTAACAACATTCTGCTGGATGAAAATTTTGAGGCTCATGTTGGTGATTTTGGTTTGGCAAAAGTGATTGACATGCCCCAGTCGAAATCGATGTCTGCTGTTGCTGGATCTTATGGTTATATAGCTCCTGAATATGCATATACCATGAAGGTCACAGAAAAGTGTGACATTTATAGTTATGGTGTTGTGCTCTTGGAACTGCTAACCGGAAGAACTCCAGTTCAGCCACTAGAGCAAGGAGGTGATCTTGTCACATGGGTGAGAAACCATATCCGGGACCACAACAAGACATTGACACCAGGGATACTTGACAGTCGTGTGGATCATGAAGACCAAACCACCATGAATCACATGCTCACTGTTTTGAAGCTTGCTTTACTGTGCACAAGTGTGTCTCCTACCAAGAGGCCATCAATGCGGGAAGTTGTGTTGATGCTCATCGAGTCGAACGAGCGAGAAGGAAACTTAACACTCACTCAAACATACCATGATCTTCCTTCCAAAGATGGCATGTGA 2595 0.4073 MLNSLKELVLWGNQLSGPIPKEIGNCSSLENIALYGNNLVGPIPKEIGNLKSVRWLYLYRNKLNGTIPREIGNLSSCLDIDISENSLVGDIPSEFGKISGLSLLFLFENHLTGVIPNKFSSLKNLTKLDLSINNLTGPIPLGFQYLTKMYQLQLFDNSLSGIIPQGLGLHSPLWVVDFSDNKLTGRIPPHLCRNSRLMLLNLATNQLYGNIPTGILNCESLAQLLLLGNRLTGSFPSELCKLEKLIAIDLNENMFSGPLPADIGNCHKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNLFTGRIPPEIFWCQRLQRLDLSQNNFSGSLPDELGTLQHLEILKLSDNKLSGYIPAALGNLSHLNWLLMDGNYFFGEIPAQLGSLSSLQIAMDLSYNNLSGRIPVQLSNLNMLEYLFLNNNHLDGEIPGSFEELSSLLGCNFSYNNLSGPIPSTKIFRSMAVSSYIGGNNGLCGAPLSACGTDPSSRSSGESFDSPRAKMVMIIAASVGGVSLIFILVILYFMRRPREFVDSFGSTEPPSPDSDIYFPPKEGFTFHDLVEATKRFHESYVIGKGACGTVYKAMMKSGRTIAVKKLASNREGDNIENSFRAEISTLGRIRHRNIVKLYGFCYHQGFNLLIYEYMERGSLGELLHGSATTLEWSTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVTWVRNHIRDHNKTLTPGILDSRVDHEDQTTMNHMLTVLKLALLCTSVSPTKRPSMREVVLMLIESNEREGNLTLTQTYHDLPSKDGM 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3097 864 ProSiteProfiles Protein kinase domain profile. 566 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g3097 864 Gene3D Phosphorylase Kinase; domain 1 541 643 - -
Ssu7g3097 864 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 1 850 - -
Ssu7g3097 864 SMART serkin_6 566 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g3097 864 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 850 - -
Ssu7g3097 864 Pfam Leucine rich repeat 316 374 IPR001611 GO:0005515
Ssu7g3097 864 SUPERFAMILY Protein kinase-like (PK-like) 542 839 IPR011009 -
Ssu7g3097 864 Gene3D Ribonuclease Inhibitor 170 489 IPR032675 -
Ssu7g3097 864 Gene3D Transferase(Phosphotransferase) domain 1 644 857 - -
Ssu7g3097 864 SMART LRR_typ_2 411 434 IPR003591 -
Ssu7g3097 864 SMART LRR_typ_2 2 26 IPR003591 -
Ssu7g3097 864 SMART LRR_typ_2 338 361 IPR003591 -
Ssu7g3097 864 SMART LRR_typ_2 122 145 IPR003591 -
Ssu7g3097 864 SMART LRR_typ_2 290 314 IPR003591 -
Ssu7g3097 864 SMART LRR_typ_2 50 74 IPR003591 -
Ssu7g3097 864 SUPERFAMILY L domain-like 217 480 - -
Ssu7g3097 864 Pfam Protein kinase domain 567 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g3097 864 SUPERFAMILY L domain-like 2 233 - -
Ssu7g3097 864 Gene3D Ribonuclease Inhibitor 1 169 IPR032675 -
Ssu7g3097 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 687 699 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3097 Ssu-Chr7 72280794 72284170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3097 2 841 Receptor kinase-like Gene Family AT5G65700 40.207 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ssu7g3097 Pkinase 6.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3097 - - gmx:100805792 1570.44