Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3087 ATGGTACAATTCCAACAACTGAAACCAGGTTTCTCACATTGTGGAGCAAGAGATAATGCAACTGAAGACAAGAAAGCACTGAAAGCAAGTATTGGGAACTCTTTGTTGCCATACATTGCCGATTCTTCGAATACATCTAGAAGTGCCTTCACTGGAAAGTGTAAACTAGATAATAAAACACTTCCAGGTCCTAATATATCTGTGGACCGTGGCAAGAGTATTTCTCTGTCTAATGATTCTCAGTCACAAAATGAGAAACAAGTGTCTTTGCCTCCTCATGTTTCTACCACTCCACGAGGTAGAGGGCACAAGAGATTGGTACGAAATGGGTGCATTTCACCTCATAATATTGCAGCAAGGGCAAAACAATTAGCTGAACAGAGCAGCCATCAGACCAAAGATGTTGAACAGAGTCATGCTGGTCATTCAGTTTCTAACAATACAGTGTCATCGCATAGTGTTGATGATATAGTTACTGAAGAGAGAGGCACTGGTAGAGTGAAGGGAAAGGAAGTACTTTTTCATCCTTCATCACATGGACTTAATGCTGAAACTTTTCACACTGCTAGCAGCAGCCCTGTGATAAATTATGAAGAGGTCAATGGTACCAGTAATTCTATAAGACATTCACTTCAATACTCTGGGGTACAAAGTGGTTGGAGAACTACACATAATGAGAGGAATGCTGATTGGCACTTGTATGATGTAAATAGGCATCATTTGAGGAGAAATAATGATGTTGGAAGATTTATTAATAGACAGAATACAAACAGAATGGACAGAAGAAACACTGGGAGTGGTCAAAGCAGCAAGCACGTACATGGTTCTCTATCAGATCATACAGCTCAACCAACTTCTGTGATCATTCCGGATATGAACCAGTCATCTGGAACCCGTTCTACTGCTGATATTCTGACTAAAAGGCAAAGGAAACGTGAATCACCTTCGGGAAATCCTAATGAAGCATCTTCTAATTCAGAAATATGTTCCTCGAGCCCTGTCTTATATCCTGAAGTGGTTGAGTTGTTATCCACACCAACCCAGAGACCTGTCTCGGATCCTGAAGTGGTTGAGTTGTTATCCACACCAAGGTATGCCAACAGATCATTTGaagatttaaatgataatgacaataatagCTCAGAAGCCCGGGCGAGACAAGTGGAAGCAGATGAGATATTGGCACGTGAACTCCAAGAACAATTGTATCATGATGATTCTTTTGAAGGCAGAGGGATTGATGAACATTTAGCATGGGAGCTGCAGCATGCAGAGGATCTTCAGCGTACATCTATGGATAGTCATGATATATATCATCCTACAGGGTTTCTTAGGGCAAATAGACAGCCTCGTACACGGTCTCATCAAAATCCTTCTAGAAGGAGAGCTATGCCTCAAGTTTCTTTCTCTAATAGAATGTCACAGTGGAGGAGTCGCGTTACAAGTCGGACTCGGTCACCTATCATATCATCTAGAGGAAGAGGCCCCCACTTTCCCCATGATATGGACATAGACATGAGACTTGATAtattggaagcttttgaggatTCAATAGGGGATTTCAGTGATATGGGAACGGCTGAAGACATCTTTCATGCGCGGCGTGATTTCAATGAAGATGATTATGAAATGTTATTGGCCCTTGATGAGGGAAATCACCAACATACTGGTGCATCTGCCAATCAGATCAATAGCTTGCCGCAGTCCACCATCCAGTTTTGGGGCAGGGAACCTGGTGAGACAGAAAATAGGGGTTGTGGGAAATTgggaataattttaaattcaacacTGATATATGTTCCCATTCATTTGCCACAGACTGACAACTTCGCAGAGGCATGTGCCATATGTCTTGAGACCCCAGCCAAGGGAGAAACTATTCGCCACCTTCCTTTGTGTTATCTCAGCCACTTCATTTTGCCTTTTGAAGGTAAAAGGCAAAAGTTGAAATTTTCTTCTGGGGACATGAATGATGCACATATTGAGCTAACTGTTCTGAATCTCGGTGTTGTAATTGAACTTCTACTGCTGGTGGTAATGAAGAATCTGCAAAGCAGTGGCAACTCTGAAGGCCGTATTATTTCTTAA 2088 0.41 MVQFQQLKPGFSHCGARDNATEDKKALKASIGNSLLPYIADSSNTSRSAFTGKCKLDNKTLPGPNISVDRGKSISLSNDSQSQNEKQVSLPPHVSTTPRGRGHKRLVRNGCISPHNIAARAKQLAEQSSHQTKDVEQSHAGHSVSNNTVSSHSVDDIVTEERGTGRVKGKEVLFHPSSHGLNAETFHTASSSPVINYEEVNGTSNSIRHSLQYSGVQSGWRTTHNERNADWHLYDVNRHHLRRNNDVGRFINRQNTNRMDRRNTGSGQSSKHVHGSLSDHTAQPTSVIIPDMNQSSGTRSTADILTKRQRKRESPSGNPNEASSNSEICSSSPVLYPEVVELLSTPTQRPVSDPEVVELLSTPRYANRSFEDLNDNDNNSSEARARQVEADEILARELQEQLYHDDSFEGRGIDEHLAWELQHAEDLQRTSMDSHDIYHPTGFLRANRQPRTRSHQNPSRRRAMPQVSFSNRMSQWRSRVTSRTRSPIISSRGRGPHFPHDMDIDMRLDILEAFEDSIGDFSDMGTAEDIFHARRDFNEDDYEMLLALDEGNHQHTGASANQINSLPQSTIQFWGREPGETENRGCGKLGIILNSTLIYVPIHLPQTDNFAEACAICLETPAKGETIRHLPLCYLSHFILPFEGKRQKLKFSSGDMNDAHIELTVLNLGVVIELLLLVVMKNLQSSGNSEGRIIS 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3087 695 MobiDBLite consensus disorder prediction 248 303 - -
Ssu7g3087 695 MobiDBLite consensus disorder prediction 120 164 - -
Ssu7g3087 695 MobiDBLite consensus disorder prediction 450 497 - -
Ssu7g3087 695 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 64 631 - -
Ssu7g3087 695 MobiDBLite consensus disorder prediction 138 154 - -
Ssu7g3087 695 MobiDBLite consensus disorder prediction 246 329 - -
Ssu7g3087 695 MobiDBLite consensus disorder prediction 70 94 - -
Ssu7g3087 695 PANTHER OS11G0582100 PROTEIN 64 631 - -
Ssu7g3087 695 MobiDBLite consensus disorder prediction 450 489 - -
Ssu7g3087 695 MobiDBLite consensus disorder prediction 56 106 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3087 368 645 C3H Transcription Factor Family AT1G04790 38.816 5.05e-40 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3087 - - aprc:113872307 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g3087 7 71653350 71660044 Ssu7g3087 7 71653350 71660044 ECH