Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3075 ATGACAAGTCCCGCAGAAGAGTATTCTTCTTTATCCTATTCAAAAGGCGAACCCACTCCTCCAGGGCCATCGAAGCTGAAGCAGCGGGGCGTGAAGAGGAAGCTCCCGACCGACTCCGACGTTGGAAACGAGATTCTGGCGATAGAGGATGGTAGCACAGGTAAGAAGCCTGCCATGTTCCAACGAATATGGAGCGAGAAAGACGAGAAAGAAATCCTGAAAGCGTTAGCGGAGTTCGTCGCTGACACCGGCCTGGAGCCTTACAAGGAGGTGTACGCATTCCATGACTTCTTGAAAAAATCAAAGCCCCTCGAGACTTCAGCTCTCCAACTGAAGGAGAAGATTCGTAGGATGGAAAAAAAGTTCATGAACTCCACCAAAGGCAAAAGCAAGACCAAGCTCGATTTCGAGATCCTTCAGCTGGCCCAAGAAGGCTGGGCCTGCCGCTTTGGAGGCTTTGGAAGAGAGGGACGCTGA 477 0.5136 MTSPAEEYSSLSYSKGEPTPPGPSKLKQRGVKRKLPTDSDVGNEILAIEDGSTGKKPAMFQRIWSEKDEKEILKALAEFVADTGLEPYKEVYAFHDFLKKSKPLETSALQLKEKIRRMEKKFMNSTKGKSKTKLDFEILQLAQEGWACRFGGFGREGR 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3075 158 PANTHER STOREKEEPER PROTEIN 24 146 - -
Ssu7g3075 158 MobiDBLite consensus disorder prediction 1 54 - -
Ssu7g3075 158 MobiDBLite consensus disorder prediction 1 17 - -
Ssu7g3075 158 PANTHER BNAANNG10740D PROTEIN-RELATED 24 146 IPR007592 GO:0006355
Ssu7g3075 158 Pfam Protein of unknown function, DUF573 60 133 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3075 Ssu-Chr7 71080060 71080536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3075 50 123 GeBP Transcription Factor Family AT1G61730 48.649 3.76e-17 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Ssu7g3075 DUF573 6.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3075 - - vra:106779331 93.5893