Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3074 ATGGCTGTTGACTTGTCAAATCTCTACAAAAAATCAGGCCTCAAATCACTTGACGAGTTCCTCTCCGGGAAGACCTACATTTCTGAGATCAACTCACAAACGAGGACATCACAGTGTTTGCTGCTGTCTGGGAGAATCCAGGTGACACTTTTCCCAATGTTGACAAGTGGTGCAAGCTTGTCGCTTCTCACCTTGTTGCAAGGTGTCAAACATGCTGTTCTGCTCGAGTTTTACCCTTGGAATCGTCAGACAGACTCGAAGAAGCTGGAAGAGGCTGTTCGCAGTGTTGAGATGACTGGTCTGTGGTGGGGACAATCCAAACTGGTTCCTGATTATTTTGGGATCAACAATTTGAAGATCGTGCTAATCACTGTCCATTACCTTGCACCTGTGCGATGCGTTATTAGGGACTGCCTGAGAGCCAGCAGCGAGCATGCCCAAAACTGTAGCTTGGTTGCAAGATGTGACATTGATGCATGGTTTAACGATGTTGcataa 498 0.4639 MAVDLSNLYKKSGLKSLDEFLSGKTYISEINSQTRTSQCLLLSGRIQVTLFPMLTSGASLSLLTLLQGVKHAVLLEFYPWNRQTDSKKLEEAVRSVEMTGLWWGQSKLVPDYFGINNLKIVLITVHYLAPVRCVIRDCLRASSEHAQNCSLVARCDIDAWFNDVA 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3074 165 PANTHER TRANSLATION ELONGATION FACTOR EF1B/RIBOSOMAL PROTEIN S6-RELATED 70 153 - -
Ssu7g3074 165 SUPERFAMILY eEF-1beta-like 70 125 IPR036219 -
Ssu7g3074 165 Gene3D - 67 162 IPR014717 -
Ssu7g3074 165 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 70 153 - -
Ssu7g3074 165 Pfam EF-1 guanine nucleotide exchange domain 73 127 IPR014038 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3074 Ssu-Chr7 71054171 71055789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3074 70 153 Eukaryotic Initiation Factors Gene Family AT5G19510 47.674 6.54e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3074 K03232 - csin:114311186 89.3521