Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3057 atgggAATGGCCGTGGCGAATGGTGATTTGCTGAGTGAGAAAGCGTCAGCGATGAGAGAGTCTTTGGAGAGAAGCCAAACCATAACAGACGACGTCGTTTCAATTCTGGGTTCTTTCGATCACCGCCTCTCCACCCTTGAAACCGCCATGCGCCCTACCCAGATCAGAACTCATTCCATTCGGAAAGCTCACGAGAACATTGATAGGACTTTGAAGGCTGCTGAGGCGATATTGGCTCACTTTGATCAATATTATCAGGCAGAAGCAAAAATAGTTGAAGGACCACATGAAGACGTGAAGGACTATCTTGAAGCAATTGATCAGCTGAGAAGAAACGTTAGATTTTTTGGCAATAAGAAGGGTTTTAAGAGTGATGATGGTATTGTGATCCATGCCAATAATTTGATAACCGAAGCTATTTCTAAGCTAGAAGATGAGTTTAAGCGGCTATTATCATCTTACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGGTTGTCTTCCAAACTCAATGCGACCTTCATCGGTATCACCAGGTCGTGATGGTGTTCCTAATGGCAAGAATCATTCTTCTAATATCCATTCTGAGCCACATAAAAATAATGCTGATGCTGTTGTATACACACCTCCTGTTCTTATACCACCGAGAATTTTGCCATTACTCAATGATTTAACCCAGCAACTGGTTCAAGCTGGTCACCAACAACAGTTGCTCAAAATATACAGAGATTCCCGTTCTAATGTGTTGGAAGAAAGCCTGCAAAAGCTTGGAGTTGAGAAACTCGGCAAAGATGATGTTCAAAAGCTACAATGGGAGGTTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATTGCTGTCAAATTGTTGTTTGCTGGTGAACGGAAAGTTTGTGATCAGATATTTGAAGGATTTGACTCACTTAGTGATCAGTGTTTTGCTGAAGTAACTACAAACAGTATTTCCATGCTACTTAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCACCTGAAAAGTTATTTGTACTTTTGGACATGTACGAAATATTGCAAGAGATCCTTTCAGAGATTGAAACACTCTTTAAAGGCAGAGCTTGCACCAAAATAAGAGAAGCTGTTATGGGTTTGACAAAACAGCTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAGAATGATGCTACAAAGACTGCAGTAACTGATGGAACTGTCCATCCTTTGACAAGCTATGTGATTAACTATGTGAAGTTTTTATTTGACTATCGGTCTACCTTAAACCAACTTTTCCGAGGGTTTGAAGGGGAAGGTGATTCTTCACAGCTGGCATCTGTGACAATGCGAATATTGCAAGCTCTTCAAACCAATTTAGATGGGAAATCAAAGCAATATAGAGACCCTGCTTTGACACACCTGTTTCTCATGAACAACATTCATTATATTGTCAGATCAGTTCGGAGGTCTGAAGCAAAGGATTTGTTGGGGGATGATTGGATACAACGGCATAGGAAGATTGTGCAACAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTCCCTCTCTATTCAGGGCCTCATCTCATCAGGTGGTGGGAGTAGTACTGCTGGTGCAGATGGGGGCAGTAGTGGTGCTTCAAGAGCAATTGTTAAAGACAGGTTTAAGGCATTCAATACAATGTTTGAGGAACTTCATCAGAAACAATCTCAGTGGACCGTACCAGACTCTGAGTTGCGAGAGTCTCTTATTCTTGCAGTTGCTGAAGTCCTGTTGCCTGCCTATAGATCATTTGTGAAACGTTTTGGGCCTCTAGTGGAGAATGTAAAGGGTAGTCAGAGGTACAACAAATACACTGCTGAAGATCTGGAGCGAATCTTGGGTGaattttttgaaggaaaaaacaTGACTGATTCAAAGCGGTAA 1956 0.4136 MGMAVANGDLLSEKASAMRESLERSQTITDDVVSILGSFDHRLSTLETAMRPTQIRTHSIRKAHENIDRTLKAAEAILAHFDQYYQAEAKIVEGPHEDVKDYLEAIDQLRRNVRFFGNKKGFKSDDGIVIHANNLITEAISKLEDEFKRLLSSYSKPVEPERLFGCLPNSMRPSSVSPGRDGVPNGKNHSSNIHSEPHKNNADAVVYTPPVLIPPRILPLLNDLTQQLVQAGHQQQLLKIYRDSRSNVLEESLQKLGVEKLGKDDVQKLQWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSDQCFAEVTTNSISMLLSFGEAIAKSKRSPEKLFVLLDMYEILQEILSEIETLFKGRACTKIREAVMGLTKQLAQTAQETFGDFEEAVENDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLNQLFRGFEGEGDSSQLASVTMRILQALQTNLDGKSKQYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWIQRHRKIVQQHANQYKRNAWAKILQSLSIQGLISSGGGSSTAGADGGSSGASRAIVKDRFKAFNTMFEELHQKQSQWTVPDSELRESLILAVAEVLLPAYRSFVKRFGPLVENVKGSQRYNKYTAEDLERILGEFFEGKNMTDSKR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3057 651 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 647 - -
Ssu7g3057 651 MobiDBLite consensus disorder prediction 184 198 - -
Ssu7g3057 651 Pfam Exo70 exocyst complex subunit 280 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu7g3057 651 SUPERFAMILY Cullin repeat-like 77 642 IPR016159 -
Ssu7g3057 651 Gene3D Exocyst complex component Exo70 75 651 - -
Ssu7g3057 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 647 IPR004140 GO:0000145|GO:0006887
Ssu7g3057 651 MobiDBLite consensus disorder prediction 166 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3057 Ssu-Chr7 70441943 70454427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3057 3 651 EXO70 exocyst subunit family AT5G03540 70.354 0.0 935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3057 K07195 - gmx:100775958 1132.09