Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3039 ATGATCTCTCTAAACTCGTGGCATCTCCTCCAGATACTTACATGCATTCTTCTTCTGACTCAGACATATTCTAAGGATGAGCGAAAGAGCTATATTGTCTACATGGGTGATCATCCCAGGGGTGTCCAATCCACAAAATTACTTCACATTAGTATGGTTCAAAATATCCTCGGCAGCAAATTTGCACCAGATGCTTTGCTACATAGCTACAAGAAGAGTTTTAACGGATTTGTTGCAAAACTAACAGAAGAGGAAGCAGTGAGAATGGCAGGATTGGACGGTGTGGTTTCGGTtttccaaaacaaaaggaataagCTGCAAACAACAAAGTCTTGGGACTTCGTAGGCTTCCCTCAGAATGTCAAAAGAGCACGTATAGAGAGCGACATAATTGTTGGAGTAATAGATTACGGAATTTGGCCTGAGTCTGATAGTTTTAATGACAAAGGTTTTGGTCCACCAGCACGAAAATGGAAGGGCACTTGCCATAACTTCACCTGCAACaaGTTATGCCTGCAAAATTCTTTAGATGAAAATTTGGTGAAGGGAAAGATTGTTTTGTGTGATGGCTTTCAAGGTACCACAGTTGTGGGATTGGTTTCTGGGGCTGCTGGTATTTTAGTAAGAAGTTTATCGCCAAAAGATGTCGCATTTACATTTGCGTTGCCAGCGGTTATCCTTAGTCGAATAGATGGGAACCTCATACAGTCTTACATAAATTTAACAagTAATCCGACAGCCATTATATTTAAGAGTAATGAAGGCAAAGACTTGTTAGCCCCTTACGTAGCTTCATTCTCATCTAGAGGTCCAAATGCAATTACTTCAAACATTCTTAAGCCTGATATAGCTGCTCCAGGAGTTGACATTTTAGCTGCATGGTCTCCAATCGGTCCTGTTTCTGAGGTCAAAGGtgatgagagaaaaacaaactaTAATATACAGTCTGGCACTTCAATGGCATGCCCTCATGCTACTGCAGTTGCTGCCTATATCAAATCATTTCATCCTGATTGGTCTCCTGCAGCAATCAAATCAGCATTAATGACTACTGGTAATGAGTGTTCTCAATTTCTAAATCACATAAATATAACTAatgaatatttttccttttga 1116 0.3835 MISLNSWHLLQILTCILLLTQTYSKDERKSYIVYMGDHPRGVQSTKLLHISMVQNILGSKFAPDALLHSYKKSFNGFVAKLTEEEAVRMAGLDGVVSVFQNKRNKLQTTKSWDFVGFPQNVKRARIESDIIVGVIDYGIWPESDSFNDKGFGPPARKWKGTCHNFTCNKLCLQNSLDENLVKGKIVLCDGFQGTTVVGLVSGAAGILVRSLSPKDVAFTFALPAVILSRIDGNLIQSYINLTSNPTAIIFKSNEGKDLLAPYVASFSSRGPNAITSNILKPDIAAPGVDILAAWSPIGPVSEVKGDERKTNYNIQSGTSMACPHATAVAAYIKSFHPDWSPAAIKSALMTTGNECSQFLNHINITNEYFSF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3039 371 Pfam Peptidase inhibitor I9 30 105 IPR010259 -
Ssu7g3039 371 ProSiteProfiles Serine proteases, subtilase domain profile. 1 371 - -
Ssu7g3039 371 Gene3D Peptidase S8/S53 domain 257 356 IPR036852 GO:0004252|GO:0006508
Ssu7g3039 371 Gene3D Peptidase S8/S53 domain 129 168 IPR036852 GO:0004252|GO:0006508
Ssu7g3039 371 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 168 IPR045051 -
Ssu7g3039 371 PRINTS Subtilisin serine protease family (S8) signature 188 201 IPR015500 -
Ssu7g3039 371 PRINTS Subtilisin serine protease family (S8) signature 316 332 IPR015500 -
Ssu7g3039 371 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Ssu7g3039 371 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 167 355 IPR045051 -
Ssu7g3039 371 SUPERFAMILY Subtilisin-like 3 355 IPR036852 GO:0004252|GO:0006508
Ssu7g3039 371 PANTHER PUTATIVE-RELATED 20 168 - -
Ssu7g3039 371 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 107 IPR037045 -
Ssu7g3039 371 ProSitePatterns Serine proteases, subtilase family, serine active site. 317 327 IPR023828 -
Ssu7g3039 371 PANTHER PUTATIVE-RELATED 167 355 - -
Ssu7g3039 371 Pfam Subtilase family 260 352 IPR000209 GO:0006508|GO:0008236
Ssu7g3039 371 Gene3D - 169 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3039 Ssu-Chr7 69861461 69866029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3039 169 351 Subtilisin-like Serine Gene Family AT5G59100 52.459 3.99e-52 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3039 - - pvy:116132518 307.76